Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 OR56B2P-201ENST00000317102 954 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AC107977.1-201ENST00000355745 939 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 RNA5SP455-201ENST00000365190 119 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CKS1BP61024 SNORA17A-201ENST00000391185 133 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 AIMP1P1-201ENST00000418670 937 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 OR2AM1P-201ENST00000422137 422 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 RPL21P43-201ENST00000425440 472 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS1BP61024 MTCYBP31-201ENST00000438855 1122 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AC245517.2-201ENST00000442890 346 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AL163193.1-201ENST00000444895 788 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS1BP61024 OR52Y1P-201ENST00000452418 828 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 ATP5G1P3-201ENST00000463301 410 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 STRADBP1-201ENST00000478954 1281 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 RNA5SP43-201ENST00000516559 110 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC027455.1-201ENST00000574104 594 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC005520.3-201ENST00000602874 370 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AC130352.1-201ENST00000602979 661 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 AC010424.2-201ENST00000607594 443 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC100847.1-201ENST00000611316 481 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 RN7SL722P-201ENST00000617780 284 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 RN7SL565P-201ENST00000618246 284 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 AL359757.1-201ENST00000623176 255 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 SNORA17.5-201ENST00000630429 132 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS1BP61024 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.18□□□□□ -1.9
CKS1BP61024 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS1BP61024 HSPD1P14-201ENST00000432666 1618 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CKS1BP61024 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CKS1BP61024 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS1BP61024 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS1BP61024 PRO1804-201ENST00000623780 2050 ntBASIC3.18□□□□□ -1.9
CKS1BP61024 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CKS1BP61024 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS1BP61024 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.17□□□□□ -1.9
CKS1BP61024 MFSD8-216ENST00000641147 4009 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC091152.2-201ENST00000591628 2569 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC024560.2-201ENST00000507981 1497 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC138915.3-201ENST00000562908 1389 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS1BP61024 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CKS1BP61024 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.17□□□□□ -1.9
CKS1BP61024 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CKS1BP61024 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CKS1BP61024 MIR921-201ENST00000401133 56 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 MTHFD2P2-201ENST00000407725 247 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 RNA5SP306-201ENST00000411087 107 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 RPL35AP24-201ENST00000413846 330 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS1BP61024 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 AF228730.2-201ENST00000438784 848 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.17□□□□□ -1.9
CKS1BP61024 AC000111.2-201ENST00000448200 210 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC092647.2-201ENST00000452998 253 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AL389915.2-201ENST00000454576 441 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 HMGB3P30-201ENST00000457863 606 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.17□□□□□ -1.9
CKS1BP61024 RPS4XP1-201ENST00000482189 787 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AL035404.1-201ENST00000497982 568 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKS1BP61024 PGAM1P13-201ENST00000507497 754 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.17□□□□□ -1.9
CKS1BP61024 RNU1-6P-201ENST00000516290 144 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 RNU6-1231P-201ENST00000517185 103 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.17□□□□□ -1.9
CKS1BP61024 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.17□□□□□ -1.9
CKS1BP61024 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.17□□□□□ -1.9
CKS1BP61024 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.17□□□□□ -1.9
CKS1BP61024 AC092490.3-201ENST00000545370 572 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms