Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
RNF144AP50876 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF144AP50876 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF144AP50876 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.59□□□□□ -1.36
RNF144AP50876 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF144AP50876 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RNF144AP50876 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.59□□□□□ -1.36
RNF144AP50876 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF144AP50876 AC125232.1-201ENST00000452554 1408 ntBASIC6.59□□□□□ -1.36
RNF144AP50876 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF144AP50876 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF144AP50876 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 AL080312.1-201ENST00000256654 824 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.58□□□□□ -1.36
RNF144AP50876 Y_RNA.135-201ENST00000363439 95 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 DEFB109C-201ENST00000382575 264 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 DEFB109B-201ENST00000382656 264 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 RNU6-606P-201ENST00000384721 111 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 MIR514A2-201ENST00000385131 88 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 MIR514A3-201ENST00000385132 88 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 MRPL42P3-201ENST00000401492 326 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AL590290.1-201ENST00000405336 380 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 RNU6-193P-201ENST00000410977 107 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF144AP50876 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 NIP7P1-201ENST00000433227 512 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AL731534.1-201ENST00000434711 269 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 FABP5P2-201ENST00000439042 408 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 RPS24P13-201ENST00000442520 397 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AC011742.2-201ENST00000443818 352 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 H2AFZP6-201ENST00000444403 394 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AL353803.3-201ENST00000444641 335 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC005517.1-201ENST00000452091 489 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 RPS24P6-201ENST00000452670 400 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 RPS20P32-201ENST00000456044 356 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF144AP50876 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 Y_RNA.653-201ENST00000459091 95 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 GMFBP1-201ENST00000467831 427 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF144AP50876 RN7SKP233-201ENST00000517005 110 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 RN7SKP98-201ENST00000517070 156 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 RN7SKP283-201ENST00000517197 270 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.58□□□□□ -1.36
RNF144AP50876 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC024405.1-201ENST00000532521 1042 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AP000889.2-201ENST00000532684 490 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.58□□□□□ -1.36
RNF144AP50876 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF144AP50876 ATP5J2P4-201ENST00000538774 267 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC006120.1-201ENST00000579375 546 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 AC005357.1-201ENST00000588399 301 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 BX005040.2-201ENST00000620504 370 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RNF144AP50876 VPS35P1-201ENST00000563400 1518 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 AP002800.1-201ENST00000624982 2225 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RNF144AP50876 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF144AP50876 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF144AP50876 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 AC007996.1-201ENST00000620414 2821 ntBASIC6.58□□□□□ -1.36
RNF144AP50876 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF144AP50876 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms