Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC6A12P48065 MIR4737-201ENST00000583979 81 ntBASIC4.54□□□□□ -1.68
SLC6A12P48065 AC005242.1-201ENST00000585658 438 ntBASIC4.54□□□□□ -1.68
SLC6A12P48065 AC090525.3-201ENST00000605601 189 ntBASIC4.54□□□□□ -1.68
SLC6A12P48065 COX6CP4-201ENST00000605798 228 ntBASIC4.54□□□□□ -1.68
SLC6A12P48065 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC6A12P48065 OR7A19P-201ENST00000608051 733 ntBASIC4.54□□□□□ -1.68
SLC6A12P48065 AL096803.3-201ENST00000609032 532 ntBASIC4.54□□□□□ -1.68
SLC6A12P48065 AC234782.5-201ENST00000617723 324 ntBASIC4.54□□□□□ -1.68
SLC6A12P48065 AL138955.1-201ENST00000622881 1040 ntBASIC4.54□□□□□ -1.68
SLC6A12P48065 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC6A12P48065 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
SLC6A12P48065 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SLC6A12P48065 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
SLC6A12P48065 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC6A12P48065 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC6A12P48065 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SLC6A12P48065 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SLC6A12P48065 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A12P48065 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AL136164.3-201ENST00000624429 3978 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 NEAT1-202ENST00000501122 22743 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 AC103591.2-201ENST00000265259 766 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 MIR921-201ENST00000401133 56 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AC013404.1-201ENST00000413068 249 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC6A12P48065 MTND4P11-201ENST00000417020 1058 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AL121882.1-201ENST00000422893 417 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC6A12P48065 RPS20P1-201ENST00000434853 354 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 AC005154.2-201ENST00000438110 379 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 AL513321.1-201ENST00000441175 761 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A12P48065 H2AFZP5-201ENST00000446960 382 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 RPS3AP41-201ENST00000462701 778 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 RPL36AP41-201ENST00000493820 306 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 MTCO2P9-201ENST00000503214 694 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 AC110760.3-202ENST00000515177 371 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC6A12P48065 RN7SKP276-201ENST00000516242 268 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 SCARNA1-201ENST00000517138 166 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 CDH12P4-201ENST00000517835 295 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 CDH12P3-201ENST00000517935 295 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 CDH12P1-201ENST00000518435 295 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 SOX5P1-201ENST00000524155 1127 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC6A12P48065 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC6A12P48065 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AC006116.7-201ENST00000590141 756 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AC090948.2-201ENST00000607363 564 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 AC055764.2-201ENST00000610089 670 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 Mico1.1-201ENST00000611698 204 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC6A12P48065 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC6A12P48065 AL672167.1-205ENST00000641112 3080 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 AC135352.1-201ENST00000506173 1418 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SLC6A12P48065 DDX18P4-201ENST00000511690 1966 ntBASIC4.53□□□□□ -1.68
SLC6A12P48065 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
SLC6A12P48065 ASNSP1-201ENST00000518311 1939 ntBASIC4.52□□□□□ -1.69
SLC6A12P48065 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SLC6A12P48065 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC6A12P48065 SDAD1P1-202ENST00000524156 2051 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms