Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 AC012158.1-204ENST00000483430 465 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
NEDD4P46934 RN7SKP122-201ENST00000515923 296 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AC006064.5-201ENST00000541782 248 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.05□□□□□ -1.6
NEDD4P46934 GLRXP2-201ENST00000555594 321 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 MIR3939-201ENST00000582614 106 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 AL161729.3-201ENST00000603533 673 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AL354696.1-201ENST00000614652 497 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AL445567.2-201ENST00000618935 498 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NEDD4P46934 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 MFSD8-242ENST00000641690 4199 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 ST13P16-201ENST00000401760 781 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AL358176.3-201ENST00000420757 454 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 NIPA2P1-201ENST00000426223 976 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD4P46934 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD4P46934 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD4P46934 MTND2P3-201ENST00000452458 470 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD4P46934 RN7SL41P-201ENST00000476144 297 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AC025181.1-201ENST00000477507 416 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AC091167.1-201ENST00000492017 396 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AC108145.1-201ENST00000503770 153 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 STMN1P2-201ENST00000508435 439 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD4P46934 AC106806.2-201ENST00000509365 500 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 MTND2P31-201ENST00000512602 616 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.04□□□□□ -1.6
NEDD4P46934 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD4P46934 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD4P46934 MTND6P33-201ENST00000571794 183 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD4P46934 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD4P46934 KATNBL1P1-201ENST00000605192 748 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AC241377.1-201ENST00000619797 406 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AC019278.1-201ENST00000623516 479 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 AC079298.2-201ENST00000623885 459 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.04□□□□□ -1.6
NEDD4P46934 AC019072.1-201ENST00000604535 1551 ntBASIC5.04□□□□□ -1.6
NEDD4P46934 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NEDD4P46934 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEDD4P46934 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.04□□□□□ -1.6
NEDD4P46934 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
NEDD4P46934 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
NEDD4P46934 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
NEDD4P46934 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD4P46934 RNU1-108P-201ENST00000362556 161 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD4P46934 MT-RNR1-201ENST00000389680 954 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 RPL6P29-201ENST00000414863 865 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.03□□□□□ -1.6
NEDD4P46934 OR13Z1P-201ENST00000416141 834 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.03□□□□□ -1.6
NEDD4P46934 VN1R31P-201ENST00000417498 730 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 RCC2P2-201ENST00000422174 918 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 EIF4EP1-201ENST00000422311 642 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 CEACAMP1-201ENST00000434624 1035 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 AC092447.2-201ENST00000435487 669 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 AC114878.1-201ENST00000441166 358 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 AL512326.1-201ENST00000443050 721 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.03□□□□□ -1.6
NEDD4P46934 GEMIN8P3-201ENST00000445417 720 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.03□□□□□ -1.6
NEDD4P46934 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD4P46934 RPS23P7-201ENST00000466210 444 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 UQCRHP4-201ENST00000471686 272 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD4P46934 AC134698.5-201ENST00000519444 336 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD4P46934 AC069240.1-201ENST00000548774 375 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD4P46934 SETP1-201ENST00000556014 845 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NEDD4P46934 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.03□□□□□ -1.6
NEDD4P46934 AC006272.2-201ENST00000594725 163 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 FAM27D1-201ENST00000612308 341 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 MIR3653-201ENST00000625572 110 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 MIR6830-201ENST00000636015 70 ntBASIC5.03□□□□□ -1.6
NEDD4P46934 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD4P46934 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD4P46934 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD4P46934 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.03□□□□□ -1.6
NEDD4P46934 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.03□□□□□ -1.6
NEDD4P46934 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD4P46934 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEDD4P46934 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NEDD4P46934 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms