Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
APOBEC1P41238 HMGN2P6-201ENST00000551091 273 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.52□□□□□ -1.69
APOBEC1P41238 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.52□□□□□ -1.69
APOBEC1P41238 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.52□□□□□ -1.69
APOBEC1P41238 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.52□□□□□ -1.69
APOBEC1P41238 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.52□□□□□ -1.69
APOBEC1P41238 MIR4472-2-201ENST00000582069 67 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 AC009948.4-201ENST00000604692 675 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 AC087783.2-201ENST00000605070 562 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 AL450336.1-201ENST00000605180 586 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 AL049794.2-201ENST00000616301 365 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.52□□□□□ -1.69
APOBEC1P41238 AC123767.1-202ENST00000620407 817 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 AP002799.1-201ENST00000623552 423 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.52□□□□□ -1.69
APOBEC1P41238 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.52□□□□□ -1.69
APOBEC1P41238 BX649567.1-201ENST00000642071 1134 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
APOBEC1P41238 AL731532.2-201ENST00000623542 1953 ntBASIC4.52□□□□□ -1.69
APOBEC1P41238 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
APOBEC1P41238 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
APOBEC1P41238 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
APOBEC1P41238 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.52□□□□□ -1.69
APOBEC1P41238 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.52□□□□□ -1.69
APOBEC1P41238 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
APOBEC1P41238 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
APOBEC1P41238 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
APOBEC1P41238 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.51□□□□□ -1.69
APOBEC1P41238 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.51□□□□□ -1.69
APOBEC1P41238 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.51□□□□□ -1.69
APOBEC1P41238 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
APOBEC1P41238 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
APOBEC1P41238 RNA5SP507-201ENST00000363603 121 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 RNU6-353P-201ENST00000364266 108 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
APOBEC1P41238 RNU1-106P-201ENST00000384382 164 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
APOBEC1P41238 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.51□□□□□ -1.69
APOBEC1P41238 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 GJA6P-201ENST00000415117 1042 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.51□□□□□ -1.69
APOBEC1P41238 OR5AW1P-201ENST00000426334 1006 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.51□□□□□ -1.69
APOBEC1P41238 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.51□□□□□ -1.69
APOBEC1P41238 AC009263.1-201ENST00000441193 1239 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 FHP1-201ENST00000442741 703 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 RPL34P20-201ENST00000442771 351 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AC092647.3-201ENST00000443044 633 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AL137845.2-201ENST00000444292 988 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 MTND1P33-201ENST00000446251 917 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 MTND2P8-201ENST00000450555 1025 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 RN7SL319P-201ENST00000480656 221 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 RPSAP50-201ENST00000481955 852 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.51□□□□□ -1.69
APOBEC1P41238 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.51□□□□□ -1.69
APOBEC1P41238 RPS27AP18-201ENST00000515536 459 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 RNU6-311P-201ENST00000516224 102 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 RN7SKP147-201ENST00000517154 244 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 Y_RNA.719-201ENST00000517156 106 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
APOBEC1P41238 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.51□□□□□ -1.69
APOBEC1P41238 OR8A2P-201ENST00000528631 952 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.51□□□□□ -1.69
APOBEC1P41238 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.51□□□□□ -1.69
APOBEC1P41238 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.51□□□□□ -1.69
APOBEC1P41238 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.51□□□□□ -1.69
APOBEC1P41238 BNIP3P4-201ENST00000604946 565 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AC009974.1-201ENST00000608881 455 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AL627230.1-201ENST00000613077 211 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AC140725.3-201ENST00000616193 880 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AL591926.8-201ENST00000616876 211 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AC109809.1-201ENST00000619665 545 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AC019206.1-201ENST00000621938 425 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AC109454.4-201ENST00000623411 649 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.51□□□□□ -1.69
APOBEC1P41238 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 AC099786.3-201ENST00000565735 1410 ntBASIC4.51□□□□□ -1.69
APOBEC1P41238 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.51□□□□□ -1.69
APOBEC1P41238 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.51□□□□□ -1.69
APOBEC1P41238 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
APOBEC1P41238 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
APOBEC1P41238 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.51□□□□□ -1.69
APOBEC1P41238 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOBEC1P41238 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOBEC1P41238 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.5□□□□□ -1.69
APOBEC1P41238 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms