Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 AC140172.1-201ENST00000502928 141 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 AC073358.1-201ENST00000505671 684 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 AC103833.1-201ENST00000517442 172 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.74□□□□□ -1.65
HNF4AP41235 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 MTND4LP25-201ENST00000570218 163 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 CYCSP40-201ENST00000575927 294 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 AC040174.2-201ENST00000602701 465 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.74□□□□□ -1.65
HNF4AP41235 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HNF4AP41235 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HNF4AP41235 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.74□□□□□ -1.65
HNF4AP41235 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HNF4AP41235 MAPK10-320ENST00000641462 6696 ntBASIC4.74□□□□□ -1.65
HNF4AP41235 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.74□□□□□ -1.65
HNF4AP41235 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HNF4AP41235 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
HNF4AP41235 AL049737.1-201ENST00000413920 1403 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AC009643.2-201ENST00000603543 1448 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HNF4AP41235 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HNF4AP41235 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HNF4AP41235 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HNF4AP41235 AL137100.1-201ENST00000556703 1620 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.73□□□□□ -1.65
HNF4AP41235 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HNF4AP41235 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HNF4AP41235 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HNF4AP41235 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.73□□□□□ -1.65
HNF4AP41235 AP002530.1-201ENST00000405705 684 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AL450992.3-201ENST00000413192 568 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 GAPDHP49-201ENST00000421421 961 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.73□□□□□ -1.65
HNF4AP41235 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.73□□□□□ -1.65
HNF4AP41235 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.73□□□□□ -1.65
HNF4AP41235 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 AL691517.1-201ENST00000440833 1235 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 MRPL48P1-201ENST00000445390 636 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 MTND2P6-201ENST00000455337 1030 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 RPL23AP71-201ENST00000470966 469 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 MRPS33P2-201ENST00000507850 322 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 SNORA26.10-201ENST00000516427 141 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 RN7SKP82-201ENST00000516786 223 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.73□□□□□ -1.65
HNF4AP41235 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.73□□□□□ -1.65
HNF4AP41235 AC092451.2-201ENST00000538746 658 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.73□□□□□ -1.65
HNF4AP41235 AC093014.1-201ENST00000548926 724 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.73□□□□□ -1.65
HNF4AP41235 AL136520.1-202ENST00000555494 763 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.73□□□□□ -1.65
HNF4AP41235 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.73□□□□□ -1.65
HNF4AP41235 AP005119.2-201ENST00000579735 1105 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.73□□□□□ -1.65
HNF4AP41235 AC067852.7-201ENST00000623270 535 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AC008758.3-201ENST00000507003 1829 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 AC100871.1-201ENST00000507871 1456 ntBASIC4.73□□□□□ -1.65
HNF4AP41235 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HNF4AP41235 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.73□□□□□ -1.65
HNF4AP41235 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HNF4AP41235 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HNF4AP41235 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HNF4AP41235 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HNF4AP41235 OR51H2P-202ENST00000641424 3046 ntBASIC4.72□□□□□ -1.65
HNF4AP41235 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HNF4AP41235 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HNF4AP41235 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HNF4AP41235 AC004022.2-201ENST00000413824 193 ntBASIC4.72□□□□□ -1.65
HNF4AP41235 TATDN1P1-201ENST00000414123 891 ntBASIC4.72□□□□□ -1.65
HNF4AP41235 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.72□□□□□ -1.65
HNF4AP41235 AL357078.2-201ENST00000416486 427 ntBASIC4.72□□□□□ -1.65
HNF4AP41235 ARL2BPP3-201ENST00000421226 480 ntBASIC4.72□□□□□ -1.65
HNF4AP41235 MTND2P9-201ENST00000422293 931 ntBASIC4.72□□□□□ -1.65
HNF4AP41235 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HNF4AP41235 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.72□□□□□ -1.65
HNF4AP41235 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.72□□□□□ -1.65
HNF4AP41235 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms