Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 RPL23AP59-201ENST00000399415 461 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AL589647.1-201ENST00000402485 466 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AL136310.1-201ENST00000404926 654 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 BTF3P8-201ENST00000414577 526 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.81□□□□□ -1.48
SMARCA1P28370 OR5M12P-201ENST00000423388 929 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.81□□□□□ -1.48
SMARCA1P28370 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AC084290.1-201ENST00000434995 374 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 TXNP5-201ENST00000441043 315 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 CYCSP24-201ENST00000445119 316 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AL589765.3-201ENST00000446084 462 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AC022431.1-201ENST00000450941 438 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AC021660.1-201ENST00000465006 554 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AC073073.1-201ENST00000493920 463 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 ENPP7P11-201ENST00000505915 627 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.81□□□□□ -1.48
SMARCA1P28370 RPS27AP18-201ENST00000515536 459 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AC012339.2-201ENST00000523996 453 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AC008033.2-201ENST00000542626 177 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AC006349.1-201ENST00000555526 235 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AL138478.1-201ENST00000612252 832 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SMARCA1P28370 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.81□□□□□ -1.48
SMARCA1P28370 GVINP1-202ENST00000531871 7271 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.81□□□□□ -1.48
SMARCA1P28370 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SMARCA1P28370 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AL133268.1-201ENST00000405676 1401 ntBASIC5.81□□□□□ -1.48
SMARCA1P28370 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SMARCA1P28370 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SMARCA1P28370 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SMARCA1P28370 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA1P28370 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA1P28370 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.8□□□□□ -1.48
SMARCA1P28370 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA1P28370 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA1P28370 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.8□□□□□ -1.48
SMARCA1P28370 MAPK10-328ENST00000641553 4009 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA1P28370 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SMARCA1P28370 RN7SKP104-201ENST00000362605 328 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 RNU4-51P-201ENST00000364206 140 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA1P28370 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA1P28370 RNU6-452P-201ENST00000384406 107 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 RNU6-636P-201ENST00000384598 107 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC119751.3-201ENST00000399720 670 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 DNAJC19P6-201ENST00000401853 280 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA1P28370 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.8□□□□□ -1.48
SMARCA1P28370 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 C1DP1-201ENST00000426049 402 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 RBMY2QP-201ENST00000429799 1147 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC092685.1-201ENST00000447960 1243 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AL035407.2-201ENST00000454090 378 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 RPS6P2-201ENST00000454208 705 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 RN7SL610P-201ENST00000463845 291 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AC004263.1-201ENST00000479327 332 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 RPL32P9-201ENST00000487963 407 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC023050.1-201ENST00000498198 304 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AC093890.1-201ENST00000502554 540 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AC140172.1-201ENST00000502928 141 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA1P28370 RNA5SP230-201ENST00000517039 122 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 MTCO2P15-201ENST00000532655 656 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.8□□□□□ -1.48
SMARCA1P28370 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AL359219.2-201ENST00000555184 348 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA1P28370 TVP23CP2-201ENST00000571473 623 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AC061975.8-201ENST00000587058 721 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AC011487.3-201ENST00000593607 453 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AC013444.2-201ENST00000603317 787 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 MTND3P19-201ENST00000603825 345 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 BX005214.3-202ENST00000619809 325 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.8□□□□□ -1.48
SMARCA1P28370 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.8□□□□□ -1.48
SMARCA1P28370 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.8□□□□□ -1.48
SMARCA1P28370 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms