Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 IGKV2-38-201ENST00000517443 247 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 VTA1P2-201ENST00000520205 911 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 AC013701.1-201ENST00000522657 465 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL3P19876 AC090819.1-201ENST00000523800 1111 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.6□□□□□ -1.83
CXCL3P19876 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL3P19876 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL3P19876 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL3P19876 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL3P19876 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL3P19876 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.6□□□□□ -1.83
CXCL3P19876 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL3P19876 AC007599.1-201ENST00000568688 1174 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 MIR1269B-201ENST00000580405 75 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL3P19876 SUMO2P15-201ENST00000604285 278 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 AP003392.5-201ENST00000607857 415 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 AC128687.2-201ENST00000609657 566 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 EIF3FP1-201ENST00000613970 806 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 AC022467.1-201ENST00000614738 749 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL3P19876 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL3P19876 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.6□□□□□ -1.83
CXCL3P19876 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL3P19876 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL3P19876 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL3P19876 NCAPGP1-201ENST00000505112 1814 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL3P19876 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL3P19876 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL3P19876 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL3P19876 AL590763.1-201ENST00000398297 1545 ntBASIC3.6□□□□□ -1.83
CXCL3P19876 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC009951.1-201ENST00000623674 2614 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL3P19876 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
CXCL3P19876 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
CXCL3P19876 A2MP1-204ENST00000566278 4130 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 RNU1-106P-201ENST00000384382 164 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 MT-TP-201ENST00000387461 68 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 AL034403.1-201ENST00000399414 885 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 RN7SKP273-201ENST00000411392 314 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL3P19876 IFNNP1-201ENST00000429219 553 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 MTCO1P54-201ENST00000430139 712 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 MTCO3P21-201ENST00000430791 643 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL3P19876 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 RPL7AP52-201ENST00000458096 790 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 METTL15P1-201ENST00000481421 1045 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 HPRT1P2-201ENST00000505250 544 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 AC018797.3-201ENST00000513388 1241 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL3P19876 RN7SKP147-201ENST00000517154 244 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.59□□□□□ -1.83
CXCL3P19876 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CXCL3P19876 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC017076.1-201ENST00000607613 578 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 AL121612.2-201ENST00000612261 482 ntBASIC3.59□□□□□ -1.83
CXCL3P19876 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.59□□□□□ -1.83
CXCL3P19876 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.59□□□□□ -1.83
CXCL3P19876 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.59□□□□□ -1.84
CXCL3P19876 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.59□□□□□ -1.84
CXCL3P19876 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL3P19876 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL3P19876 AC008725.1-201ENST00000605123 2263 ntBASIC3.58□□□□□ -1.84
CXCL3P19876 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CXCL3P19876 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL3P19876 RNU1-18P-201ENST00000363062 164 ntBASIC3.58□□□□□ -1.84
CXCL3P19876 U8.4-201ENST00000363626 134 ntBASIC3.58□□□□□ -1.84
CXCL3P19876 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CXCL3P19876 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.58□□□□□ -1.84
CXCL3P19876 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.58□□□□□ -1.84
CXCL3P19876 RN7SKP267-201ENST00000410381 285 ntBASIC3.58□□□□□ -1.84
CXCL3P19876 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.58□□□□□ -1.84
CXCL3P19876 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms