Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC092821.2-201ENST00000545710 2042 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.84□□□□□ -1.16
CSB-PGBD3P0DP91 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 RNU6-500P-201ENST00000362349 107 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 RNA5SP514-201ENST00000363717 111 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 RPL17P50-201ENST00000396131 546 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 FGF7P8-201ENST00000402994 292 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 TPT1P2-201ENST00000413105 503 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 RPL35AP24-201ENST00000413846 330 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 DNAJC19P4-201ENST00000440115 345 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 MTCO3P18-201ENST00000440206 761 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 NFU1P2-201ENST00000448700 469 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 MTND1P11-201ENST00000456661 876 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 MRE11P1-201ENST00000464884 2127 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 RPS17P15-201ENST00000475609 349 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC116337.2-201ENST00000477662 156 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 RN7SL30P-201ENST00000488416 306 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 TCP11X3P-202ENST00000514289 1254 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 BPTFP1-201ENST00000579209 492 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 MIR4260-201ENST00000583107 67 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC092354.1-201ENST00000606057 376 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AL589743.7-201ENST00000612637 233 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC037198.3-201ENST00000616754 526 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AL357080.1-201ENST00000617394 239 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC127502.3-201ENST00000636170 1206 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 SAMMSON-227ENST00000642114 1199 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AC114786.1-201ENST00000512892 1415 ntBASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CSB-PGBD3P0DP91 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 LINC02019-201ENST00000608605 2060 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 Y_RNA.311-201ENST00000365068 96 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC012498.1-201ENST00000424037 437 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 OR8F1P-201ENST00000425243 930 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 MTND5P14-201ENST00000441481 1267 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 TMED11P-201ENST00000479478 690 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 RPS23P1-201ENST00000491662 432 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC108941.1-201ENST00000502853 530 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 NDUFA5P12-201ENST00000503796 343 ntBASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC7.82□□□□□ -1.16
CSB-PGBD3P0DP91 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms