Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 OR2L1P-202ENST00000641567 1023 ntBASIC3.29□□□□□ -1.88
CXCL1P09341 LINC00561-201ENST00000565815 2738 ntBASIC3.29□□□□□ -1.88
CXCL1P09341 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.29□□□□□ -1.88
CXCL1P09341 AC092162.3-201ENST00000624511 1624 ntBASIC3.29□□□□□ -1.88
CXCL1P09341 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.29□□□□□ -1.88
CXCL1P09341 AC108467.2-201ENST00000617640 1597 ntBASIC3.29□□□□□ -1.88
CXCL1P09341 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CXCL1P09341 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CXCL1P09341 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CXCL1P09341 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.28□□□□□ -1.88
CXCL1P09341 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.28□□□□□ -1.88
CXCL1P09341 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CXCL1P09341 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CXCL1P09341 AP000756.2-201ENST00000624168 2567 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL1P09341 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.28□□□□□ -1.88
CXCL1P09341 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CXCL1P09341 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL1P09341 OR1F12-201ENST00000402365 945 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 VN1R31P-201ENST00000417498 730 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL1P09341 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 AL132765.1-201ENST00000434165 553 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC092647.3-201ENST00000443044 633 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.28□□□□□ -1.88
CXCL1P09341 AC012671.1-201ENST00000451912 203 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 IFNWP4-201ENST00000453148 294 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.28□□□□□ -1.88
CXCL1P09341 AL356390.1-201ENST00000455684 397 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 RPL7AP6-201ENST00000477943 801 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 PPIAP15-201ENST00000479662 484 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 RPL23AP72-201ENST00000492447 435 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC068305.1-201ENST00000497406 726 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 ATP5LP3-201ENST00000514223 304 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 RNU6-1231P-201ENST00000517185 103 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.28□□□□□ -1.88
CXCL1P09341 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.28□□□□□ -1.88
CXCL1P09341 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.28□□□□□ -1.88
CXCL1P09341 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.28□□□□□ -1.88
CXCL1P09341 AC027176.2-201ENST00000559166 746 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC090515.3-201ENST00000560431 315 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 BGLT3-201ENST00000564523 994 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC007599.1-201ENST00000568688 1174 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 HNRNPCP4-201ENST00000571636 900 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC099489.2-201ENST00000574976 260 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.28□□□□□ -1.88
CXCL1P09341 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.28□□□□□ -1.88
CXCL1P09341 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.28□□□□□ -1.88
CXCL1P09341 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.28□□□□□ -1.88
CXCL1P09341 AC096586.2-201ENST00000610260 441 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AC008121.2-201ENST00000614647 523 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 AL049555.1-201ENST00000562834 1933 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL1P09341 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CXCL1P09341 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.28□□□□□ -1.88
CXCL1P09341 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CXCL1P09341 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CXCL1P09341 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
CXCL1P09341 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL1P09341 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.27□□□□□ -1.89
CXCL1P09341 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL1P09341 MIR621-201ENST00000384919 96 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 MIR1282-201ENST00000408865 101 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 RPS20P14-201ENST00000412545 360 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 RSU1P3-201ENST00000412878 835 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL1P09341 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL1P09341 AL161631.1-201ENST00000417933 486 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 SEC63P1-201ENST00000425785 1258 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 RWDD4P2-201ENST00000426392 563 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.27□□□□□ -1.89
CXCL1P09341 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL1P09341 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL1P09341 CASP3P1-201ENST00000446037 609 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL1P09341 TRY2P-201ENST00000448860 689 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AC073850.1-201ENST00000449243 255 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 NDUFS5P3-201ENST00000450668 321 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AURKAPS1-201ENST00000451805 1212 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.27□□□□□ -1.89
CXCL1P09341 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 TRBV8-1-201ENST00000481590 279 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 UBA52P7-201ENST00000486088 380 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 RWDD4P1-201ENST00000488019 565 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL1P09341 AC020593.1-201ENST00000507399 299 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms