Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DPB1P04440 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 RNVU1-6-201ENST00000364688 164 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 SNORA70F-201ENST00000384142 135 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 MIR659-201ENST00000384963 97 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 CYB5AP4-201ENST00000396692 399 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 GLULP6-201ENST00000399502 913 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 RNA5SP306-201ENST00000411087 107 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 RPEP2-201ENST00000432149 701 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AL359265.2-201ENST00000434367 631 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AL392003.1-201ENST00000434394 243 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC006517.1-201ENST00000480485 328 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 NIP7P2-201ENST00000485801 544 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC093720.1-201ENST00000505681 714 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 SNORD39.2-201ENST00000579995 76 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC068790.5-201ENST00000602741 355 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 BNIP3P7-201ENST00000605641 516 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AL135786.2-201ENST00000608422 615 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AL590410.1-201ENST00000617925 333 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 MIR7703-201ENST00000620784 77 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC021106.3-201ENST00000623925 531 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 LINC01808-202ENST00000641680 1116 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC018555.1-201ENST00000567548 1980 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DPB1P04440 AC107021.2-201ENST00000567714 2095 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 MAPK10-373ENST00000641983 6772 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 IQCB2P-201ENST00000401788 1633 ntBASIC3.88□□□□□ -1.79
HLA-DPB1P04440 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 TTC39DP-201ENST00000416781 1688 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 VN2R3P-201ENST00000422626 1412 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 ZNF962P-201ENST00000443465 3140 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 OR10J6P-201ENST00000289731 930 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC010132.2-201ENST00000295493 1043 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC079741.1-201ENST00000321498 212 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 SNORD113.2-201ENST00000364166 89 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 RNA5SP505-201ENST00000364748 108 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 RNU6-729P-201ENST00000384399 107 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 MT-RNR1-201ENST00000389680 954 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 RNA5SP397-201ENST00000391323 118 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 MIR937-201ENST00000401271 86 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 RPL5P19-201ENST00000404228 893 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 DHFRP5-201ENST00000406944 564 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 RPS20P14-201ENST00000412545 360 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC013470.3-201ENST00000420252 1194 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 YWHAZP2-201ENST00000440317 728 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 PTMAP3-201ENST00000447474 330 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 OR9N1P-201ENST00000491296 333 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 RPS27AP18-201ENST00000515536 459 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC069061.3-201ENST00000582254 823 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AL133243.1-201ENST00000614487 366 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 MIR7702-201ENST00000621931 59 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AL049536.1-201ENST00000625043 744 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 MFSD8-242ENST00000641690 4199 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 AL592182.3-201ENST00000642132 3304 ntBASIC3.87□□□□□ -1.79
HLA-DPB1P04440 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPB1P04440 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPB1P04440 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DPB1P04440 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DPB1P04440 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPB1P04440 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DPB1P04440 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HLA-DPB1P04440 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPB1P04440 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPB1P04440 RNU6-618P-201ENST00000363518 112 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms