Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 YWHAZP1-201ENST00000556286 722 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.53□□□□□ -1.68
CLPTM1O96005 AC025918.2-201ENST00000558683 763 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.53□□□□□ -1.68
CLPTM1O96005 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.53□□□□□ -1.68
CLPTM1O96005 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.53□□□□□ -1.68
CLPTM1O96005 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.53□□□□□ -1.68
CLPTM1O96005 AC008638.3-201ENST00000603341 463 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC079880.2-201ENST00000603790 1213 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AL121652.1-201ENST00000608851 448 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 SDR42E1P1-201ENST00000611327 477 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 AC023509.5-201ENST00000617434 807 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.53□□□□□ -1.68
CLPTM1O96005 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLPTM1O96005 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLPTM1O96005 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLPTM1O96005 AC018529.3-201ENST00000624212 2254 ntBASIC4.53□□□□□ -1.68
CLPTM1O96005 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLPTM1O96005 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
CLPTM1O96005 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.52□□□□□ -1.69
CLPTM1O96005 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLPTM1O96005 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CLPTM1O96005 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 MIR93-201ENST00000385024 80 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AL080315.1-201ENST00000406055 466 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.52□□□□□ -1.69
CLPTM1O96005 BX664727.1-201ENST00000416024 466 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC006065.1-201ENST00000422539 802 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC013262.1-201ENST00000426710 252 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 IFNWP4-201ENST00000453148 294 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AL354710.1-201ENST00000453641 246 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC005532.2-201ENST00000467154 373 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 RN7SL222P-201ENST00000476452 299 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC037198.2-201ENST00000478845 733 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC012158.1-204ENST00000483430 465 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC108729.1-201ENST00000487812 947 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 SUMO1P1-201ENST00000497904 306 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 GTF2IP9-201ENST00000502460 301 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC083829.1-201ENST00000503756 657 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.52□□□□□ -1.69
CLPTM1O96005 PPBPP1-201ENST00000510807 373 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.52□□□□□ -1.69
CLPTM1O96005 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC018552.3-201ENST00000567416 561 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 HNRNPCP4-201ENST00000571636 900 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 RN7SL339P-201ENST00000580597 296 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC091057.3-201ENST00000602684 733 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC023762.1-201ENST00000603280 584 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC104687.2-201ENST00000604442 342 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AC018754.1-201ENST00000607486 925 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.52□□□□□ -1.69
CLPTM1O96005 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.52□□□□□ -1.69
CLPTM1O96005 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 AL049555.1-201ENST00000562834 1933 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.52□□□□□ -1.69
CLPTM1O96005 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLPTM1O96005 AC092747.4-201ENST00000620519 1861 ntBASIC4.52□□□□□ -1.69
CLPTM1O96005 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLPTM1O96005 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLPTM1O96005 AC092079.1-201ENST00000558620 1985 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLPTM1O96005 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CLPTM1O96005 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLPTM1O96005 RPL23P2-201ENST00000320371 421 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 RN7SKP113-201ENST00000363891 295 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 RN7SKP273-201ENST00000411392 314 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 DPPA2P3-201ENST00000411853 655 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 MTCO2P17-201ENST00000424336 677 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.51□□□□□ -1.69
CLPTM1O96005 EEF1B2P5-201ENST00000444820 548 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 PSMC1P13-201ENST00000458195 985 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 AC092691.2-201ENST00000461787 803 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 RPL5P13-201ENST00000462840 709 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 AC009127.1-201ENST00000467090 155 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms