Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
O00370 AC019050.1-201ENST00000418508 492 ntBASIC4.9□□□□□ -1.63
O00370 OR2X1P-201ENST00000421144 687 ntBASIC4.9□□□□□ -1.63
O00370 Z74021.1-201ENST00000423610 407 ntBASIC4.9□□□□□ -1.63
O00370 AL606490.7-201ENST00000433136 191 ntBASIC4.9□□□□□ -1.63
O00370 AL353597.2-202ENST00000434901 373 ntBASIC4.9□□□□□ -1.63
O00370 Z99127.2-201ENST00000441426 334 ntBASIC4.9□□□□□ -1.63
O00370 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.9□□□□□ -1.63
O00370 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.9□□□□□ -1.63
O00370 VN1R48P-201ENST00000448149 1036 ntBASIC4.9□□□□□ -1.63
O00370 AC073264.2-201ENST00000448886 166 ntBASIC4.9□□□□□ -1.63
O00370 CEACAMP6-201ENST00000452007 574 ntBASIC4.9□□□□□ -1.63
O00370 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.9□□□□□ -1.63
O00370 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
O00370 METTL15P1-201ENST00000481421 1045 ntBASIC4.9□□□□□ -1.63
O00370 AC021087.2-201ENST00000504656 1203 ntBASIC4.9□□□□□ -1.63
O00370 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.9□□□□□ -1.63
O00370 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.9□□□□□ -1.63
O00370 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.9□□□□□ -1.63
O00370 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.9□□□□□ -1.63
O00370 AL136520.1-202ENST00000555494 763 ntBASIC4.9□□□□□ -1.63
O00370 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.9□□□□□ -1.63
O00370 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.9□□□□□ -1.63
O00370 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.9□□□□□ -1.63
O00370 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.9□□□□□ -1.63
O00370 AL450270.1-201ENST00000606160 391 ntBASIC4.9□□□□□ -1.63
O00370 CR589904.2-201ENST00000612533 440 ntBASIC4.9□□□□□ -1.63
O00370 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.9□□□□□ -1.63
O00370 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.9□□□□□ -1.63
O00370 AC055839.1-201ENST00000634467 498 ntBASIC4.9□□□□□ -1.63
O00370 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.9□□□□□ -1.63
O00370 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
O00370 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
O00370 AC090017.1-201ENST00000548612 1779 ntBASIC4.9□□□□□ -1.63
O00370 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.9□□□□□ -1.63
O00370 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
O00370 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
O00370 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
O00370 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
O00370 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.89□□□□□ -1.63
O00370 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
O00370 AC021146.4-201ENST00000309229 279 ntBASIC4.89□□□□□ -1.63
O00370 AC079741.1-201ENST00000321498 212 ntBASIC4.89□□□□□ -1.63
O00370 SNORA70F-201ENST00000384142 135 ntBASIC4.89□□□□□ -1.63
O00370 Z98745.1-201ENST00000402553 494 ntBASIC4.89□□□□□ -1.63
O00370 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.89□□□□□ -1.63
O00370 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.89□□□□□ -1.63
O00370 AL590139.1-201ENST00000416267 400 ntBASIC4.89□□□□□ -1.63
O00370 AC004690.1-201ENST00000418216 328 ntBASIC4.89□□□□□ -1.63
O00370 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.89□□□□□ -1.63
O00370 AC048351.1-201ENST00000420064 602 ntBASIC4.89□□□□□ -1.63
O00370 RPL21P43-201ENST00000425440 472 ntBASIC4.89□□□□□ -1.63
O00370 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.89□□□□□ -1.63
O00370 AP000949.1-201ENST00000438328 629 ntBASIC4.89□□□□□ -1.63
O00370 YWHAZP2-201ENST00000440317 728 ntBASIC4.89□□□□□ -1.63
O00370 AL935212.3-201ENST00000450729 284 ntBASIC4.89□□□□□ -1.63
O00370 AL353718.1-201ENST00000451028 517 ntBASIC4.89□□□□□ -1.63
O00370 ISCUP1-201ENST00000454451 448 ntBASIC4.89□□□□□ -1.63
O00370 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.89□□□□□ -1.63
O00370 AC104763.1-201ENST00000475274 360 ntBASIC4.89□□□□□ -1.63
O00370 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
O00370 AC008628.1-201ENST00000508663 265 ntBASIC4.89□□□□□ -1.63
O00370 SNORA26.10-201ENST00000516427 141 ntBASIC4.89□□□□□ -1.63
O00370 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.89□□□□□ -1.63
O00370 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.89□□□□□ -1.63
O00370 AP006289.1-201ENST00000538089 277 ntBASIC4.89□□□□□ -1.63
O00370 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.89□□□□□ -1.63
O00370 AC063949.1-201ENST00000552900 865 ntBASIC4.89□□□□□ -1.63
O00370 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.89□□□□□ -1.63
O00370 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.89□□□□□ -1.63
O00370 AC018552.3-201ENST00000567416 561 ntBASIC4.89□□□□□ -1.63
O00370 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.89□□□□□ -1.63
O00370 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.89□□□□□ -1.63
O00370 ADAD1P2-201ENST00000588476 646 ntBASIC4.89□□□□□ -1.63
O00370 COX6CP4-201ENST00000605798 228 ntBASIC4.89□□□□□ -1.63
O00370 AL136370.1-201ENST00000608166 691 ntBASIC4.89□□□□□ -1.63
O00370 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.89□□□□□ -1.63
O00370 AC135803.1-201ENST00000608748 565 ntBASIC4.89□□□□□ -1.63
O00370 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
O00370 AC020978.9-201ENST00000624380 1141 ntBASIC4.89□□□□□ -1.63
O00370 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.89□□□□□ -1.63
O00370 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
O00370 LINC01109-201ENST00000603837 3081 ntBASIC4.89□□□□□ -1.63
O00370 AL391684.1-202ENST00000641293 1636 ntBASIC4.89□□□□□ -1.63
O00370 AC092079.1-201ENST00000558620 1985 ntBASIC4.89□□□□□ -1.63
O00370 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.89□□□□□ -1.63
O00370 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.89□□□□□ -1.63
O00370 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.89□□□□□ -1.63
O00370 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.89□□□□□ -1.63
O00370 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
O00370 AL355852.1-201ENST00000454081 1771 ntBASIC4.88□□□□□ -1.63
O00370 AC125257.1-201ENST00000560400 2930 ntBASIC4.88□□□□□ -1.63
O00370 MFSD8-216ENST00000641147 4009 ntBASIC4.88□□□□□ -1.63
O00370 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
O00370 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
O00370 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
O00370 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
O00370 SNORD115-48-201ENST00000364764 76 ntBASIC4.88□□□□□ -1.63
O00370 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.88□□□□□ -1.63
O00370 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms