Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1AO00322 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
UPK1AO00322 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.04□□□□□ -1.76
UPK1AO00322 AC008536.1-201ENST00000602872 669 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 AL354984.3-201ENST00000604803 325 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 AC090948.1-201ENST00000607464 549 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK1AO00322 AC019193.2-201ENST00000610012 634 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 RN7SL722P-201ENST00000617780 284 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 RN7SL565P-201ENST00000618246 284 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 RMST_9.1-201ENST00000619945 193 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK1AO00322 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 AC090017.1-201ENST00000548612 1779 ntBASIC4.04□□□□□ -1.76
UPK1AO00322 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1AO00322 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1AO00322 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1AO00322 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 AC233968.1-201ENST00000611212 1300 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
UPK1AO00322 RNU6-729P-201ENST00000384399 107 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 AL583835.1-201ENST00000399570 407 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 MIR937-201ENST00000401271 86 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 TRIM60P17-201ENST00000415181 719 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 AC096644.3-201ENST00000416788 338 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 RPS27AP7-201ENST00000422792 455 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 RBMY1KP-201ENST00000423480 476 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 CNOT7P1-201ENST00000429006 852 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1AO00322 AC011998.1-201ENST00000433403 117 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 RPL23AP52-201ENST00000439311 478 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 PHBP16-201ENST00000446318 950 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 PTMAP3-201ENST00000447474 330 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 RN7SL98P-201ENST00000462271 300 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1AO00322 RN7SL810P-201ENST00000493031 276 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 AC104164.2-201ENST00000496953 495 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1AO00322 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1AO00322 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1AO00322 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1AO00322 AL360157.1-201ENST00000565962 87 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 AC025175.1-201ENST00000606482 759 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 SNORA35B-201ENST00000607417 129 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.03□□□□□ -1.76
UPK1AO00322 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1AO00322 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1AO00322 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.03□□□□□ -1.76
UPK1AO00322 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
UPK1AO00322 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1AO00322 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
UPK1AO00322 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
UPK1AO00322 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1AO00322 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.02□□□□□ -1.77
UPK1AO00322 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 RNA5SP447-201ENST00000363749 119 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 RPS4XP9-201ENST00000405151 780 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 ELOCP19-201ENST00000411919 318 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1AO00322 RPL26P29-201ENST00000415623 438 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AC073136.2-201ENST00000417282 849 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1AO00322 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 RPS12P5-201ENST00000423449 371 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 EIF1P3-201ENST00000423841 334 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1AO00322 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1AO00322 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1AO00322 TXNP2-201ENST00000443918 295 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1AO00322 snoU13.1-201ENST00000459157 104 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AC096741.1-201ENST00000472250 846 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK1AO00322 PPM1AP1-201ENST00000502740 1135 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK1AO00322 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK1AO00322 RNU4-18P-201ENST00000516751 149 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 AC010476.1-201ENST00000519111 851 ntBASIC4.02□□□□□ -1.77
UPK1AO00322 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK1AO00322 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms