Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AP000756.2-201ENST00000624168 2567 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDLIM1O00151 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PDLIM1O00151 AL136164.3-201ENST00000624429 3978 ntBASIC4.46□□□□□ -1.7
PDLIM1O00151 AC027290.2-201ENST00000623210 18662 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM1O00151 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDLIM1O00151 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM1O00151 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
PDLIM1O00151 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PDLIM1O00151 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM1O00151 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDLIM1O00151 MT-TP-201ENST00000387461 68 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDLIM1O00151 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDLIM1O00151 AC093719.1-202ENST00000392735 373 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 RNA5SP239-201ENST00000410218 129 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 JKAMPP1-201ENST00000413804 919 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM1O00151 TBCAP2-201ENST00000416175 326 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 VN1R37P-201ENST00000419096 748 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 MTND4LP7-201ENST00000431728 294 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.45□□□□□ -1.7
PDLIM1O00151 HLA-N-201ENST00000437516 135 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 GSTA7P-201ENST00000438425 448 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AL353898.1-201ENST00000444055 238 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AC104651.2-201ENST00000447549 528 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.45□□□□□ -1.7
PDLIM1O00151 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.45□□□□□ -1.7
PDLIM1O00151 RN7SL97P-201ENST00000486780 299 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.45□□□□□ -1.7
PDLIM1O00151 AC021146.7-201ENST00000509604 775 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.45□□□□□ -1.7
PDLIM1O00151 AC110775.1-201ENST00000513721 462 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 IGKV2D-23-201ENST00000518179 286 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.45□□□□□ -1.7
PDLIM1O00151 AC087272.1-201ENST00000523624 533 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 OR5AZ1P-201ENST00000527448 943 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM1O00151 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.45□□□□□ -1.7
PDLIM1O00151 AL049839.1-201ENST00000556151 657 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.45□□□□□ -1.7
PDLIM1O00151 VN1R79P-201ENST00000593540 513 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AC244505.7-201ENST00000599675 272 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AC133644.2-201ENST00000608142 540 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 AL353726.1-201ENST00000614041 1000 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.45□□□□□ -1.7
PDLIM1O00151 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDLIM1O00151 HSPD1P11-201ENST00000508643 1702 ntBASIC4.45□□□□□ -1.7
PDLIM1O00151 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM1O00151 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM1O00151 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDLIM1O00151 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM1O00151 MARK2P15-201ENST00000432204 2186 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM1O00151 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM1O00151 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PDLIM1O00151 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDLIM1O00151 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 CASC19-284ENST00000642142 1868 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 OR56B2P-201ENST00000317102 954 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 RNA5SP322-201ENST00000363617 119 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 RNA5SP428-201ENST00000365129 132 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 RNA5SP455-201ENST00000365190 119 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM1O00151 AL034374.1-201ENST00000406329 351 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 RPL6P29-201ENST00000414863 865 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AL590806.1-201ENST00000415818 853 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM1O00151 DPY19L1P2-201ENST00000426647 915 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 RBMY2QP-201ENST00000429799 1147 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AL451139.1-201ENST00000434718 346 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM1O00151 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM1O00151 OR7E125P-201ENST00000443450 846 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM1O00151 HMGB3P22-202ENST00000451823 572 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM1O00151 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM1O00151 RN7SL244P-201ENST00000493405 297 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AC068305.1-201ENST00000497406 726 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 NDUFA5P12-201ENST00000503796 343 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM1O00151 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.44□□□□□ -1.7
PDLIM1O00151 AC034244.2-201ENST00000514668 858 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM1O00151 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM1O00151 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.44□□□□□ -1.7
PDLIM1O00151 TOMM20P2-201ENST00000540082 421 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.44□□□□□ -1.7
PDLIM1O00151 NMNAT1P1-201ENST00000554095 876 ntBASIC4.44□□□□□ -1.7
PDLIM1O00151 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms