Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Il3ra-202ENSMUST00000223589 738 ntBASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Odf3b-204ENSMUST00000227834 930 ntBASIC14.12□□□□□ -0.15
Gm3550W4VSN7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm3550W4VSN7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Gm3550W4VSN7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Dancr-204ENSMUST00000132389 2347 ntBASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm3550W4VSN7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.09□□□□□ -0.15
Gm3550W4VSN7 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms