Protein–RNA interactions for Protein: Q9JKF7

Mrpl39, 39S ribosomal protein L39, mitochondrial, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl39Q9JKF7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl39Q9JKF7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Gm11927-201ENSMUST00000118472 759 ntBASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Gm18671-201ENSMUST00000214826 683 ntBASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl39Q9JKF7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Mir6349-201ENSMUST00000184059 97 ntBASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.4□□□□□ -0.1
Mrpl39Q9JKF7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Gm6211-202ENSMUST00000167849 925 ntBASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mrpl39Q9JKF7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl39Q9JKF7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl39Q9JKF7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Mrpl39Q9JKF7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl39Q9JKF7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mrpl39Q9JKF7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms