Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr1Q9CY50 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Gm10653-202ENSMUST00000139570 835 ntBASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Gm10698-201ENSMUST00000182663 604 ntBASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr1Q9CY50 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr1Q9CY50 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr1Q9CY50 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr1Q9CY50 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr1Q9CY50 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr1Q9CY50 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr1Q9CY50 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssr1Q9CY50 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ssr1Q9CY50 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr1Q9CY50 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ssr1Q9CY50 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ssr1Q9CY50 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ssr1Q9CY50 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Gm12085-201ENSMUST00000119263 940 ntBASIC18■□□□□ 0.47
Ssr1Q9CY50 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18■□□□□ 0.47
Ssr1Q9CY50 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ssr1Q9CY50 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr1Q9CY50 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Ssr1Q9CY50 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr1Q9CY50 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms