Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpa1Q8VEE4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpa1Q8VEE4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Gm12933-201ENSMUST00000120203 872 ntBASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Gm37179-201ENSMUST00000194862 823 ntBASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.77■□□□□ 0.28
Rpa1Q8VEE4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpa1Q8VEE4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Gm10138-203ENSMUST00000206952 366 ntBASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpa1Q8VEE4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms