Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 AC239809.2-201ENST00000415381 517 ntBASIC20.84■□□□□ 0.93
LMO3Q8TAP4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LMO3Q8TAP4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 KRT16P5-201ENST00000455284 522 ntBASIC20.83■□□□□ 0.93
LMO3Q8TAP4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMO3Q8TAP4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.83■□□□□ 0.92
LMO3Q8TAP4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
LMO3Q8TAP4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
LMO3Q8TAP4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 TSPY20P-201ENST00000450910 630 ntBASIC20.82■□□□□ 0.92
LMO3Q8TAP4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 AC004264.1-201ENST00000608354 794 ntBASIC20.82■□□□□ 0.92
LMO3Q8TAP4 AC110285.5-201ENST00000611501 352 ntBASIC20.82■□□□□ 0.92
LMO3Q8TAP4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.82■□□□□ 0.92
LMO3Q8TAP4 AL161938.1-201ENST00000569833 2180 ntBASIC20.82■□□□□ 0.92
LMO3Q8TAP4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms