Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Gm12382-201ENSMUST00000122005 922 ntBASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Mir7071-201ENSMUST00000184847 69 ntBASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps9d1Q8C190 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Vps9d1Q8C190 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps9d1Q8C190 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Gm10517-202ENSMUST00000192970 758 ntBASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps9d1Q8C190 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Gm10698-201ENSMUST00000182663 604 ntBASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Gm37292-201ENSMUST00000192062 758 ntBASIC15.57■□□□□ 0.08
Vps9d1Q8C190 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vps9d1Q8C190 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps9d1Q8C190 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps9d1Q8C190 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.55■□□□□ 0.08
Vps9d1Q8C190 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps9d1Q8C190 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms