Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.09■□□□□ 0.17
Trim36Q80WG7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Gm9987-201ENSMUST00000069768 567 ntBASIC16.09■□□□□ 0.17
Trim36Q80WG7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trim36Q80WG7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trim36Q80WG7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim36Q80WG7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim36Q80WG7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trim36Q80WG7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.08■□□□□ 0.16
Trim36Q80WG7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim36Q80WG7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Gm12382-201ENSMUST00000122005 922 ntBASIC16.07■□□□□ 0.16
Trim36Q80WG7 Gm43799-201ENSMUST00000201845 579 ntBASIC16.07■□□□□ 0.16
Trim36Q80WG7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.07■□□□□ 0.16
Trim36Q80WG7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.07■□□□□ 0.16
Trim36Q80WG7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.07■□□□□ 0.16
Trim36Q80WG7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim36Q80WG7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim36Q80WG7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim36Q80WG7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms