Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KRT28Q7Z3Y7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KRT28Q7Z3Y7 BX119927.1-201ENST00000636596 1552 ntBASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC26.37■■□□□ 1.81
KRT28Q7Z3Y7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 HBZP1-201ENST00000354915 429 ntBASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 PVRIG2P-201ENST00000435460 978 ntBASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT28Q7Z3Y7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 AL845331.1-201ENST00000424978 1190 ntBASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 AP000347.1-202ENST00000435868 847 ntBASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 AC092329.2-201ENST00000598402 547 ntBASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT28Q7Z3Y7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT28Q7Z3Y7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT28Q7Z3Y7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC26.34■■□□□ 1.81
KRT28Q7Z3Y7 PRELID1P1-202ENST00000567272 903 ntBASIC26.34■■□□□ 1.81
KRT28Q7Z3Y7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KRT28Q7Z3Y7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 MIR4674-201ENST00000582457 87 ntBASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KRT28Q7Z3Y7 AP001271.2-201ENST00000624018 1556 ntBASIC26.33■■□□□ 1.8
KRT28Q7Z3Y7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC26.33■■□□□ 1.8
KRT28Q7Z3Y7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
KRT28Q7Z3Y7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC26.33■■□□□ 1.8
KRT28Q7Z3Y7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
KRT28Q7Z3Y7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 AL645929.1-201ENST00000420084 975 ntBASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 AC092597.1-201ENST00000487352 616 ntBASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 UNC93B7-201ENST00000509439 705 ntBASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 FEM1AP1-201ENST00000431297 1995 ntBASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT28Q7Z3Y7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms