Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Scn4bQ7M729 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn4bQ7M729 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn4bQ7M729 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Scn4bQ7M729 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn4bQ7M729 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.2■□□□□ 0.18
Scn4bQ7M729 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Gm13559-201ENSMUST00000120476 863 ntBASIC16.2■□□□□ 0.18
Scn4bQ7M729 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.2■□□□□ 0.18
Scn4bQ7M729 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn4bQ7M729 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Gm43799-201ENSMUST00000201845 579 ntBASIC16.19■□□□□ 0.18
Scn4bQ7M729 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scn4bQ7M729 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn4bQ7M729 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.18■□□□□ 0.18
Scn4bQ7M729 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Scn4bQ7M729 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn4bQ7M729 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.16■□□□□ 0.18
Scn4bQ7M729 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Gm13186-201ENSMUST00000118031 316 ntBASIC16.16■□□□□ 0.18
Scn4bQ7M729 Gm16061-201ENSMUST00000122167 857 ntBASIC16.16■□□□□ 0.18
Scn4bQ7M729 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.16■□□□□ 0.18
Scn4bQ7M729 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.16■□□□□ 0.18
Scn4bQ7M729 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms