Protein–RNA interactions for Protein: Q62219

Tgfb1i1, Transforming growth factor beta-1-induced transcript 1 protein, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1i1Q62219 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfb1i1Q62219 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfb1i1Q62219 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfb1i1Q62219 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfb1i1Q62219 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Gm44430-201ENSMUST00000203376 995 ntBASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfb1i1Q62219 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Gm10052-201ENSMUST00000168019 960 ntBASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Gm17971-201ENSMUST00000190239 806 ntBASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Gm7729-201ENSMUST00000050143 801 ntBASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfb1i1Q62219 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfb1i1Q62219 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfb1i1Q62219 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfb1i1Q62219 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tgfb1i1Q62219 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms