Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Mir1668-201ENSMUST00000184114 107 ntBASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Gm18959-201ENSMUST00000208954 655 ntBASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ctdnep1Q3TP92 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdnep1Q3TP92 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Gm6433-201ENSMUST00000118634 875 ntBASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Gm18421-201ENSMUST00000204122 625 ntBASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdnep1Q3TP92 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Gm26039-201ENSMUST00000158152 144 ntBASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdnep1Q3TP92 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Gm11336-201ENSMUST00000118168 334 ntBASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdnep1Q3TP92 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms