Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm5P62322 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm5P62322 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm5P62322 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lsm5P62322 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lsm5P62322 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm5P62322 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm5P62322 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.94□□□□□ -0.18
Lsm5P62322 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Lsm5P62322 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.94□□□□□ -0.18
Lsm5P62322 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm5P62322 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm5P62322 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Lsm5P62322 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.93□□□□□ -0.18
Lsm5P62322 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Lsm5P62322 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Lsm5P62322 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Lsm5P62322 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Lsm5P62322 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Lsm5P62322 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.93□□□□□ -0.18
Lsm5P62322 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Lsm5P62322 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm5P62322 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.92□□□□□ -0.18
Lsm5P62322 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lsm5P62322 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Lsm5P62322 Gm42778-201ENSMUST00000199644 553 ntBASIC13.92□□□□□ -0.18
Lsm5P62322 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.92□□□□□ -0.18
Lsm5P62322 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.92□□□□□ -0.18
Lsm5P62322 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm5P62322 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.91□□□□□ -0.18
Lsm5P62322 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.91□□□□□ -0.18
Lsm5P62322 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Gm2399-201ENSMUST00000104944 225 ntBASIC13.91□□□□□ -0.18
Lsm5P62322 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
Lsm5P62322 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.91□□□□□ -0.18
Lsm5P62322 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.91□□□□□ -0.18
Lsm5P62322 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.91□□□□□ -0.18
Lsm5P62322 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Lsm5P62322 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Lsm5P62322 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.91□□□□□ -0.18
Lsm5P62322 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm5P62322 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lsm5P62322 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.9□□□□□ -0.18
Lsm5P62322 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.9□□□□□ -0.18
Lsm5P62322 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms