Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tpm3P21107 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tpm3P21107 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.7■□□□□ 0.58
Tpm3P21107 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tpm3P21107 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.7■□□□□ 0.58
Tpm3P21107 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.7■□□□□ 0.58
Tpm3P21107 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Tpm3P21107 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Tpm3P21107 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm3P21107 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.69■□□□□ 0.58
Tpm3P21107 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.69■□□□□ 0.58
Tpm3P21107 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.69■□□□□ 0.58
Tpm3P21107 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.69■□□□□ 0.58
Tpm3P21107 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.69■□□□□ 0.58
Tpm3P21107 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Tpm3P21107 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Tpm3P21107 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tpm3P21107 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Tpm3P21107 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.68■□□□□ 0.58
Tpm3P21107 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Gm2399-201ENSMUST00000104944 225 ntBASIC18.68■□□□□ 0.58
Tpm3P21107 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Gm11643-201ENSMUST00000119578 864 ntBASIC18.68■□□□□ 0.58
Tpm3P21107 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Tpm3P21107 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm3P21107 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.67■□□□□ 0.58
Tpm3P21107 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.67■□□□□ 0.58
Tpm3P21107 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.67■□□□□ 0.58
Tpm3P21107 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tpm3P21107 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm3P21107 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm3P21107 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms