Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.2□□□□□ -0.46
TcraP01849 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.2□□□□□ -0.46
TcraP01849 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.2□□□□□ -0.46
TcraP01849 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
TcraP01849 Nespas-201ENSMUST00000143738 1083 ntBASIC12.2□□□□□ -0.46
TcraP01849 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Mir8112-201ENSMUST00000184382 131 ntBASIC12.2□□□□□ -0.46
TcraP01849 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.2□□□□□ -0.46
TcraP01849 Gm42642-201ENSMUST00000200683 355 ntBASIC12.2□□□□□ -0.46
TcraP01849 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.2□□□□□ -0.46
TcraP01849 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.2□□□□□ -0.46
TcraP01849 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TcraP01849 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.2□□□□□ -0.46
TcraP01849 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TcraP01849 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TcraP01849 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.19□□□□□ -0.46
TcraP01849 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.19□□□□□ -0.46
TcraP01849 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.19□□□□□ -0.46
TcraP01849 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.19□□□□□ -0.46
TcraP01849 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TcraP01849 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TcraP01849 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TcraP01849 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TcraP01849 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TcraP01849 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.18□□□□□ -0.46
TcraP01849 Gm6420-201ENSMUST00000193885 723 ntBASIC12.18□□□□□ -0.46
TcraP01849 Gm29791-202ENSMUST00000207888 369 ntBASIC12.18□□□□□ -0.46
TcraP01849 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TcraP01849 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms