Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trdmt1O55055 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trdmt1O55055 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trdmt1O55055 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.28■□□□□ 0.52
Trdmt1O55055 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trdmt1O55055 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.28■□□□□ 0.52
Trdmt1O55055 Gm37935-201ENSMUST00000192012 982 ntBASIC18.28■□□□□ 0.52
Trdmt1O55055 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
Trdmt1O55055 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trdmt1O55055 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.27■□□□□ 0.52
Trdmt1O55055 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trdmt1O55055 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trdmt1O55055 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trdmt1O55055 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trdmt1O55055 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trdmt1O55055 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.27■□□□□ 0.52
Trdmt1O55055 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trdmt1O55055 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trdmt1O55055 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.27■□□□□ 0.52
Trdmt1O55055 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.27■□□□□ 0.52
Trdmt1O55055 Gm7506-201ENSMUST00000207758 815 ntBASIC18.27■□□□□ 0.52
Trdmt1O55055 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trdmt1O55055 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.27■□□□□ 0.52
Trdmt1O55055 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trdmt1O55055 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trdmt1O55055 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trdmt1O55055 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trdmt1O55055 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.27■□□□□ 0.51
Trdmt1O55055 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trdmt1O55055 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.27■□□□□ 0.51
Trdmt1O55055 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trdmt1O55055 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trdmt1O55055 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Trdmt1O55055 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.26■□□□□ 0.51
Trdmt1O55055 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.26■□□□□ 0.51
Trdmt1O55055 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Trdmt1O55055 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.26■□□□□ 0.51
Trdmt1O55055 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.26■□□□□ 0.51
Trdmt1O55055 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trdmt1O55055 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trdmt1O55055 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trdmt1O55055 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.25■□□□□ 0.51
Trdmt1O55055 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.25■□□□□ 0.51
Trdmt1O55055 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.25■□□□□ 0.51
Trdmt1O55055 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.25■□□□□ 0.51
Trdmt1O55055 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.25■□□□□ 0.51
Trdmt1O55055 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.25■□□□□ 0.51
Trdmt1O55055 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trdmt1O55055 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trdmt1O55055 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.24■□□□□ 0.51
Trdmt1O55055 Mir5126-201ENSMUST00000175513 77 ntBASIC18.24■□□□□ 0.51
Trdmt1O55055 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Trdmt1O55055 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trdmt1O55055 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trdmt1O55055 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trdmt1O55055 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trdmt1O55055 Gm25990-201ENSMUST00000102440 86 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms