Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Gfra3O35118 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.39□□□□□ -0.11
Gfra3O35118 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gfra3O35118 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gfra3O35118 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gfra3O35118 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.39□□□□□ -0.11
Gfra3O35118 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Gfra3O35118 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gfra3O35118 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gfra3O35118 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gfra3O35118 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.38□□□□□ -0.11
Gfra3O35118 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.38□□□□□ -0.11
Gfra3O35118 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.38□□□□□ -0.11
Gfra3O35118 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.38□□□□□ -0.11
Gfra3O35118 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.38□□□□□ -0.11
Gfra3O35118 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Gfra3O35118 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.38□□□□□ -0.11
Gfra3O35118 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gfra3O35118 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.37□□□□□ -0.11
Gfra3O35118 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Gfra3O35118 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Gfra3O35118 Gm27704-201ENSMUST00000185094 107 ntBASIC14.37□□□□□ -0.11
Gfra3O35118 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.37□□□□□ -0.11
Gfra3O35118 Gm18115-201ENSMUST00000221209 621 ntBASIC14.37□□□□□ -0.11
Gfra3O35118 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gfra3O35118 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gfra3O35118 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.36□□□□□ -0.11
Gfra3O35118 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.36□□□□□ -0.11
Gfra3O35118 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.36□□□□□ -0.11
Gfra3O35118 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gfra3O35118 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gfra3O35118 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gfra3O35118 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms