Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6F6VAN0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Atf6F6VAN0 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.08■□□□□ 0.33
Atf6F6VAN0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6F6VAN0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6F6VAN0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6F6VAN0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6F6VAN0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Atf6F6VAN0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf6F6VAN0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Gm13559-201ENSMUST00000120476 863 ntBASIC17.08■□□□□ 0.32
Atf6F6VAN0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.08■□□□□ 0.32
Atf6F6VAN0 Gm10252-201ENSMUST00000209541 832 ntBASIC17.08■□□□□ 0.32
Atf6F6VAN0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6F6VAN0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6F6VAN0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf6F6VAN0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf6F6VAN0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.06■□□□□ 0.32
Atf6F6VAN0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Atf6F6VAN0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Gm16061-201ENSMUST00000122167 857 ntBASIC17.05■□□□□ 0.32
Atf6F6VAN0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf6F6VAN0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.04■□□□□ 0.32
Atf6F6VAN0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.04■□□□□ 0.32
Atf6F6VAN0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.04■□□□□ 0.32
Atf6F6VAN0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.04■□□□□ 0.32
Atf6F6VAN0 Mir6982-201ENSMUST00000184354 68 ntBASIC17.04■□□□□ 0.32
Atf6F6VAN0 Gm7889-201ENSMUST00000185591 958 ntBASIC17.04■□□□□ 0.32
Atf6F6VAN0 Gm43799-201ENSMUST00000201845 579 ntBASIC17.04■□□□□ 0.32
Atf6F6VAN0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6F6VAN0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms