Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7-1A0A0G2JEV5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7-1A0A0G2JEV5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7-1A0A0G2JEV5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav7-1A0A0G2JEV5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Gm20049-201ENSMUST00000219950 730 ntBASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7-1A0A0G2JEV5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7-1A0A0G2JEV5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7-1A0A0G2JEV5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms