Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Phf7-203ENSMUST00000226565 1971 ntBASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Gm11355-201ENSMUST00000121120 306 ntBASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-52A0A0A6YXC3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm11336-201ENSMUST00000118168 334 ntBASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-52A0A0A6YXC3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms