Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-5A0A075B6B5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-5A0A075B6B5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-5A0A075B6B5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-5A0A075B6B5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-5A0A075B6B5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-5A0A075B6B5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-5A0A075B6B5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-5A0A075B6B5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-5A0A075B6B5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-5A0A075B6B5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms