Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-6A0A075B603 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Gm37179-201ENSMUST00000194862 823 ntBASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Gm10138-203ENSMUST00000206952 366 ntBASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-6A0A075B603 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Gm10602-201ENSMUST00000098239 609 ntBASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-6A0A075B603 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-6A0A075B603 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trav6-6A0A075B603 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms