Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 RHEBP2-201ENST00000450289 600 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 OTX2P1-201ENST00000450956 354 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL645937.3-201ENST00000453647 936 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 PRDX3P4-201ENST00000470828 747 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 COPS8P2-201ENST00000473228 627 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC004815.1-201ENST00000484185 331 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 RN7SL441P-201ENST00000492388 296 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 RNU6-319P-201ENST00000516025 108 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC005868.1-201ENST00000536421 331 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 DUXAP6-201ENST00000553858 601 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL442163.2-201ENST00000553912 710 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 VN1R78P-201ENST00000597393 564 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL353778.1-201ENST00000603149 408 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL353600.1-201ENST00000608148 251 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC019080.5-201ENST00000624891 757 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AC104118.1-201ENST00000607625 1589 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 SCARNA15-201ENST00000607520 4325 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGB1Q9Y5G3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 SCN1A-220ENST00000641603 12506 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 CASC19-206ENST00000641028 1430 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 OR5H2-201ENST00000355273 945 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 RNU6-1263P-201ENST00000384601 106 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 SNORA68.2-201ENST00000391263 128 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 LRRC37BP1-201ENST00000398851 714 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AC009518.2-201ENST00000418056 731 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 MTCO3P4-201ENST00000419236 787 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 E2F6P2-201ENST00000420708 748 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AC010099.3-201ENST00000423896 409 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 MTCO1P43-201ENST00000431831 488 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AC012075.1-201ENST00000436549 580 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AL450263.2-201ENST00000439400 589 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 RPS26P2-201ENST00000440331 348 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 ARL4AP3-201ENST00000441452 574 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AC004980.3-201ENST00000447046 365 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 RAB28P3-201ENST00000448325 597 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 RPL21P47-201ENST00000483696 477 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 Y_RNA.688-201ENST00000516565 95 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 MTCO1P47-201ENST00000523889 1271 ntBASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGB1Q9Y5G3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms