Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC097461.1-201ENST00000568928 2821 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC140134.1-201ENST00000511830 3544 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC103591.2-201ENST00000265259 766 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 SNORD116-9-201ENST00000384000 95 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 SNORD116-3-201ENST00000384287 95 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 SNORD116-7-201ENST00000384404 95 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 SNORD116-5-201ENST00000384462 95 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 HNRNPDP2-201ENST00000406475 478 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 NPM1P18-201ENST00000434232 732 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AL031663.1-201ENST00000437445 219 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 CBX1P4-201ENST00000439415 457 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 RPL23AP76-201ENST00000441860 458 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AL645937.3-201ENST00000453647 936 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC091685.2-201ENST00000454924 864 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 RPL5P24-201ENST00000463742 885 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SL51P-201ENST00000468230 285 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 SNRPCP3-201ENST00000474888 476 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 RPL15P21-201ENST00000495592 567 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC072052.1-201ENST00000496556 306 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC109445.1-201ENST00000512356 383 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC008837.2-201ENST00000513076 418 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 COX6B1P6-201ENST00000522347 255 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 OR4C2P-201ENST00000530855 1064 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 MIR4675-201ENST00000577898 77 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC106791.2-201ENST00000604680 391 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC023158.2-201ENST00000614876 543 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 uc_338.7-201ENST00000621834 124 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC079248.2-201ENST00000623779 326 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC015726.3-201ENST00000624501 418 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AP000776.1-201ENST00000530032 1663 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 AC144833.1-201ENST00000567953 4089 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB1Q9Y5F3 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC018809.2-201ENST00000602436 3823 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 Z98755.1-201ENST00000407015 1384 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 SNORD56.6-201ENST00000384569 71 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 RNU1-77P-201ENST00000390868 162 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 ATP5F1P3-201ENST00000397213 657 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 RN7SKP125-201ENST00000410481 302 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 OR51A3P-201ENST00000413596 924 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AL133482.1-201ENST00000415988 498 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 AC016907.1-201ENST00000419483 435 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 NIPA2P1-201ENST00000426223 976 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 FTLP19-201ENST00000433300 394 ntBASIC5.48□□□□□ -1.53
PCDHB1Q9Y5F3 CYCSP6-201ENST00000434498 302 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms