Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 RPL23AP25-201ENST00000430973 463 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 Z85994.2-201ENST00000434327 452 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AL392003.1-201ENST00000434394 243 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 GSTA7P-201ENST00000438425 448 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 CEACAMP6-201ENST00000452007 574 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 RN7SL809P-201ENST00000482040 297 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 SNORD39.2-201ENST00000579995 76 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC069061.3-201ENST00000582254 823 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 GMCL1P2-201ENST00000605230 823 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC023813.4-201ENST00000607580 580 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC233309.1-201ENST00000619522 751 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC103858.2-201ENST00000621471 543 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 LINC00622-201ENST00000562811 1570 ntBASIC4.09□□□□□ -1.75
TRAPPC4Q9Y296 AC027290.2-201ENST00000623210 18662 ntBASIC4.09□□□□□ -1.76
TRAPPC4Q9Y296 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRAPPC4Q9Y296 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 CPHL1P-201ENST00000461341 3407 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 RNU1-44P-201ENST00000384453 163 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 RPS20P25-201ENST00000412447 352 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AL138787.1-202ENST00000437804 898 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AL138878.2-201ENST00000440581 1241 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 RNA5SP228-201ENST00000516232 133 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 UBTFL9-201ENST00000534504 1148 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AC107016.1-201ENST00000550463 337 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 SULT1C2P2-201ENST00000562517 294 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AC018555.1-201ENST00000567548 1980 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AP002360.3-201ENST00000607673 710 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AL135786.2-201ENST00000608422 615 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AL133243.1-201ENST00000614487 366 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 AC091905.2-201ENST00000623143 306 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 LINC01808-202ENST00000641680 1116 ntBASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAPPC4Q9Y296 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC073429.2-201ENST00000569694 1444 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC104297.1-201ENST00000393779 870 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AL078604.1-201ENST00000404609 466 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 RPS4XP9-201ENST00000405151 780 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 RPL23AP48-201ENST00000406913 488 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 TRIM60P17-201ENST00000415181 719 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AL590609.2-201ENST00000421430 368 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 AL391219.1-201ENST00000422570 483 ntBASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAPPC4Q9Y296 RAD1P2-201ENST00000446414 663 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms