Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 MIR5684-201ENST00000585074 65 ntBASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AC090912.3-201ENST00000609775 533 ntBASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AC097505.1-201ENST00000610199 565 ntBASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AL121772.2-201ENST00000614331 297 ntBASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 AP001273.1-201ENST00000624493 3152 ntBASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.3□□□□□ -1.4
SHANK2Q9UPX8 CASC19-261ENST00000641853 1638 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 Y_RNA.111-201ENST00000363248 100 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 MIR1271-201ENST00000408537 86 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 ZNF415P1-201ENST00000582279 1166 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 PCAT14-202ENST00000627127 3935 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 AC004656.1-201ENST00000568479 4951 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 USP9YP4-201ENST00000424401 1745 ntBASIC6.29□□□□□ -1.4
SHANK2Q9UPX8 SNORD96B-201ENST00000386148 79 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AL359643.1-201ENST00000404109 423 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AL691449.1-201ENST00000426570 421 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 RPL7P22-201ENST00000466005 733 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC108022.1-201ENST00000493466 478 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC119751.5-201ENST00000514077 770 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 HSPE1P5-201ENST00000561489 272 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC010487.1-201ENST00000594408 1172 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC114878.2-201ENST00000604863 1251 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC096553.1-201ENST00000605169 829 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC003985.2-201ENST00000562268 1669 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 PPIAP13-201ENST00000434706 478 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 RPS27AP15-201ENST00000447672 466 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC007688.1-201ENST00000475592 759 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 MIR5685-201ENST00000579080 79 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 AC019176.2-201ENST00000611579 315 ntBASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SHANK2Q9UPX8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.27□□□□□ -1.4
SHANK2Q9UPX8 Z82217.1-201ENST00000625157 8149 ntBASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 AC010266.2-201ENST00000564741 3255 ntBASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 RPS29P19-201ENST00000479709 171 ntBASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 SNORA70.24-201ENST00000517233 118 ntBASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC6.27□□□□□ -1.41
SHANK2Q9UPX8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 RAB9AP3-201ENST00000412737 573 ntBASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 RAB9AP1-201ENST00000449393 573 ntBASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 AC107982.3-201ENST00000584957 985 ntBASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms