Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU4-7P-201ENST00000364758 141 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 GSTA12P-201ENST00000402398 508 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 Z98745.1-201ENST00000402553 494 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 RPS27AP11-201ENST00000402798 447 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL139095.3-201ENST00000419672 1203 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 ZFAND6P1-201ENST00000434138 605 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC007389.2-201ENST00000434630 306 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 MRPS21P3-201ENST00000436696 262 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL627224.1-201ENST00000448334 444 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AL935212.3-201ENST00000450729 284 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 DHFRP3-201ENST00000455595 559 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC107015.1-201ENST00000466902 747 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 MIR4298-201ENST00000584380 73 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC006116.5-201ENST00000591936 559 ntBASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC8.57□□□□□ -1.04
SHROOM4Q9ULL8 AC020633.1-201ENST00000468439 2247 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 RPL7P58-201ENST00000402913 758 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 RNU6ATAC-201ENST00000408749 126 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 RPL37P1-201ENST00000432310 284 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AL606490.7-201ENST00000433136 191 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AC004938.1-201ENST00000438468 308 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AC098799.3-201ENST00000506095 438 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AC023632.4-201ENST00000517783 191 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AC090515.3-201ENST00000560431 315 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AC015912.2-201ENST00000571053 181 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 BNIP3P11-201ENST00000603878 563 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AP001153.1-201ENST00000641024 338 ntBASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SHROOM4Q9ULL8 AC058791.1-201ENST00000608412 3198 ntBASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 AC091390.3-201ENST00000426478 338 ntBASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 AC069277.2-201ENST00000454211 432 ntBASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 RPL35P6-201ENST00000490024 372 ntBASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 AL358913.1-201ENST00000554342 121 ntBASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 AP003499.2-201ENST00000624100 483 ntBASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 DDX6P1-205ENST00000441966 1436 ntBASIC8.55□□□□□ -1.04
SHROOM4Q9ULL8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 AC104260.2-201ENST00000623551 3497 ntBASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 AC093815.1-201ENST00000508637 280 ntBASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 HNRNPCP4-201ENST00000571636 900 ntBASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 AP004372.1-201ENST00000604842 844 ntBASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 AC113403.1-201ENST00000604910 193 ntBASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 AL672167.1-205ENST00000641112 3080 ntBASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SHROOM4Q9ULL8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 RNU1-132P-201ENST00000364300 164 ntBASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 RNA5SP372-201ENST00000390836 115 ntBASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 RN7SKP159-201ENST00000410657 292 ntBASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 OR10D4P-201ENST00000525892 951 ntBASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 CCNG2P1-201ENST00000549521 1000 ntBASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 AC012442.3-202ENST00000636742 206 ntBASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 TMEM30CP-203ENST00000637814 1035 ntBASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SHROOM4Q9ULL8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
SHROOM4Q9ULL8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
SHROOM4Q9ULL8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
SHROOM4Q9ULL8 RNA5SP283-201ENST00000365604 119 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms