Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 OR56B2P-201ENST00000317102 954 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 RNA5SP509-201ENST00000364577 119 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 RPL5P19-201ENST00000404228 893 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 EIF4A1P3-201ENST00000411521 244 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 SNRPFP1-201ENST00000414761 252 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 GAPDHP49-201ENST00000421421 961 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 PDSS1P1-201ENST00000422953 1114 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 RPL21P43-201ENST00000425440 472 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 RPL23AP43-201ENST00000446445 471 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AC083829.1-201ENST00000503756 657 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AC147055.1-201ENST00000509261 750 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 DYNLL1P4-201ENST00000549314 266 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 SULT1C2P2-201ENST00000562517 294 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 ADAD1P2-201ENST00000588476 646 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AC117490.2-201ENST00000610042 594 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AL121890.3-201ENST00000618494 516 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 MIR6830-201ENST00000636015 70 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 HSPA8P17-201ENST00000427029 1382 ntBASIC5.29□□□□□ -1.56
CLIP2Q9UDT6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 RNU1-130P-201ENST00000363930 160 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 FABP12P1-201ENST00000401911 322 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 GTF2IP2-201ENST00000424290 697 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC022431.1-201ENST00000450941 438 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC015795.1-201ENST00000513669 327 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC010476.1-201ENST00000519111 851 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AL590392.1-201ENST00000604960 446 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC023813.4-201ENST00000607580 580 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC005962.2-201ENST00000611427 652 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC004241.3-201ENST00000611728 517 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AC055839.1-201ENST00000634467 498 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 CPHL1P-201ENST00000461341 3407 ntBASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.28□□□□□ -1.56
CLIP2Q9UDT6 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 RNA5SP105-201ENST00000391123 113 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AL139039.2-201ENST00000407436 479 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 RAD23BP1-201ENST00000421404 1227 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 EIF2S2P3-201ENST00000428356 999 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 RPS29P17-201ENST00000430795 166 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 TPTE2P1-204ENST00000435256 593 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 RPL21P133-201ENST00000443666 476 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AC012671.1-201ENST00000451912 203 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AC093267.1-201ENST00000489176 961 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 GLRXP2-201ENST00000555594 321 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 PARP1P2-201ENST00000556806 195 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 KPNA2P3-201ENST00000584190 848 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AP001160.4-201ENST00000596971 382 ntBASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP2Q9UDT6 BMS1P21-201ENST00000634565 365 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms