Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 RPL23AP89-201ENST00000439324 255 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AC022431.1-201ENST00000450941 438 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 RPL7P32-201ENST00000457119 744 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 RN7SL585P-201ENST00000470538 280 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 RPS27AP16-201ENST00000492222 470 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AC017037.1-201ENST00000508460 471 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 RNA5SP73-201ENST00000516744 108 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 NPM1P6-201ENST00000521088 871 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 PDCD5P1-201ENST00000543528 309 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AC027176.2-201ENST00000559166 746 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AC012618.3-205ENST00000637896 1496 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 MFSD8-216ENST00000641147 4009 ntBASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS29Q9UBQ0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC010132.2-201ENST00000295493 1043 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 RNU6-398P-201ENST00000384143 109 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 MIR192-201ENST00000384915 110 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC009302.1-201ENST00000417147 390 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 LYPLA1P1-201ENST00000434514 622 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 TXNP2-201ENST00000443918 295 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 MTND6P32-201ENST00000457611 483 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC093720.1-201ENST00000505681 714 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AL592156.1-201ENST00000508758 304 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC010476.1-201ENST00000519111 851 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 OR8G5-201ENST00000524943 1041 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 OR5AN2P-201ENST00000534535 896 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC090515.3-201ENST00000560431 315 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC019193.2-201ENST00000610012 634 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AL158196.1-201ENST00000616786 434 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 AC008013.2-202ENST00000637965 364 ntBASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VPS29Q9UBQ0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AC103591.2-201ENST00000265259 766 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AL583835.1-201ENST00000399570 407 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 TRIM60P17-201ENST00000415181 719 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 P2RY10P2-201ENST00000416730 913 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 UBE2V2P4-201ENST00000447495 259 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 EIF2S2P5-201ENST00000457635 968 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 RPS29P19-201ENST00000479709 171 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AC006517.1-201ENST00000480485 328 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 TRBV8-1-201ENST00000481590 279 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 UBA52P3-201ENST00000491303 382 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 HMGB3P13-201ENST00000511263 607 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 snoU109.6-201ENST00000516831 118 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms