Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 MTCO3P35-201ENST00000485582 781 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC040958.1-201ENST00000561102 201 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC022884.3-201ENST00000579571 248 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 CCDC58P3-201ENST00000590792 430 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 AC011330.2-201ENST00000621680 635 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 OR1S1-201ENST00000624470 978 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 ADAM24P-201ENST00000398655 2101 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL20A1Q9P218 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 DDX18P4-201ENST00000511690 1966 ntBASIC5.6□□□□□ -1.51
COL20A1Q9P218 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COL20A1Q9P218 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL20A1Q9P218 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC100871.1-201ENST00000507871 1456 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL20A1Q9P218 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC010928.1-201ENST00000592477 1447 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 RBPJP2-201ENST00000618187 1444 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL20A1Q9P218 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL20A1Q9P218 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 MIR133A2-201ENST00000347538 102 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 RNU6-543P-201ENST00000362576 108 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 RNU4-51P-201ENST00000364206 140 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 RNU6-398P-201ENST00000384143 109 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 U3.30-201ENST00000391308 210 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 RNA5SP345-201ENST00000410646 108 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC092745.2-202ENST00000411880 369 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 RSU1P3-201ENST00000412878 835 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 RPL22P18-201ENST00000417197 377 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 RPL12P28-201ENST00000430852 489 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC073052.1-201ENST00000440417 714 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 MTCYBP42-201ENST00000444653 1130 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 CASP3P1-201ENST00000446037 609 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 MTND1P31-201ENST00000449206 961 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC234781.3-201ENST00000452540 973 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AL513533.1-201ENST00000453728 415 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AL133244.1-201ENST00000456007 258 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC112673.1-201ENST00000513168 575 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC100784.1-201ENST00000522790 310 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 DEFB130C-202ENST00000530001 230 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AP002812.4-201ENST00000532139 286 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC139103.1-201ENST00000534696 1030 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AL512782.1-201ENST00000603093 364 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC008745.1-201ENST00000604064 271 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC018695.5-201ENST00000605872 315 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AL451049.1-201ENST00000608672 497 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC007497.1-201ENST00000610421 561 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 VN1R74P-201ENST00000613259 503 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 MIR6780A-201ENST00000615089 68 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AL049794.2-201ENST00000616301 365 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 Z99129.2-201ENST00000619967 314 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 AP000346.3-201ENST00000622821 210 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 FRG1EP-201ENST00000634469 770 ntBASIC5.59□□□□□ -1.51
COL20A1Q9P218 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL20A1Q9P218 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
COL20A1Q9P218 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL20A1Q9P218 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms