Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 LINC02210-201ENST00000444561 288 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 MTND2P4-201ENST00000445034 1004 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 RPL21P134-201ENST00000453468 483 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC021146.8-201ENST00000507455 733 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 ST13P12-201ENST00000508958 1094 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC002456.2-201ENST00000509356 380 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 OR4C2P-201ENST00000530855 1064 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 OR5D15P-201ENST00000531671 942 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC092490.3-201ENST00000545370 572 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 MIR4420-201ENST00000583944 77 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 NBR2-204ENST00000587322 63 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC011447.4-201ENST00000587562 111 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 BNIP3P26-201ENST00000600827 554 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AP001267.4-201ENST00000602598 545 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC069545.1-201ENST00000605671 358 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC090246.1-201ENST00000616499 426 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC079248.2-201ENST00000623779 326 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 MIR4278-201ENST00000636094 69 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC068620.4-201ENST00000636730 1182 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AC021755.1-201ENST00000559747 1447 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 AP000776.1-201ENST00000530032 1663 ntBASIC5.53□□□□□ -1.52
TDP1Q9NUW8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TDP1Q9NUW8 KYNUP3-201ENST00000574386 1341 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 SNORD116-9-201ENST00000384000 95 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 SNORD116-3-201ENST00000384287 95 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 SNORD116-7-201ENST00000384404 95 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 SNORD116-5-201ENST00000384462 95 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 LUZP4P1-201ENST00000415420 344 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AL772161.1-201ENST00000439130 476 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 MTND3P1-201ENST00000441336 220 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC118469.1-201ENST00000442943 488 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC104634.1-201ENST00000452720 462 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC058823.1-201ENST00000485315 474 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC104090.1-201ENST00000506341 1171 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC111000.2-201ENST00000507775 550 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 GTF2F2P1-201ENST00000511083 675 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 EIF3KP3-201ENST00000514461 639 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 OR8A2P-201ENST00000528631 952 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 EIF4A2P5-201ENST00000529914 499 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 HIGD1AP17-201ENST00000554576 276 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC009597.2-201ENST00000604659 592 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC106791.2-201ENST00000604680 391 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC122108.2-201ENST00000611946 526 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AL354976.1-201ENST00000613843 387 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AL353726.1-201ENST00000614041 1000 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AL031658.2-201ENST00000616850 651 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 AC010608.2-201ENST00000624830 470 ntBASIC5.52□□□□□ -1.53
TDP1Q9NUW8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TDP1Q9NUW8 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms