Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 MTCO1P31-201ENST00000506355 492 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AC121161.1-201ENST00000510606 652 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 HMGB1P46-201ENST00000520062 610 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AC093014.1-201ENST00000548926 724 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AC018552.1-201ENST00000562099 811 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AC022106.2-201ENST00000620114 757 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 MIR6839-201ENST00000620425 113 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 MIR7641-1-201ENST00000627518 61 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 MAPK10-349ENST00000641767 3661 ntBASIC5.16□□□□□ -1.58
EBF3Q9H4W6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.16□□□□□ -1.58
EBF3Q9H4W6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 AC126323.6-202ENST00000568092 3511 ntBASIC5.15□□□□□ -1.58
EBF3Q9H4W6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 DDX18P6-201ENST00000450119 1997 ntBASIC5.15□□□□□ -1.58
EBF3Q9H4W6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
EBF3Q9H4W6 AC017079.1-201ENST00000333650 415 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 SNORD116-8-201ENST00000384365 95 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 SNORA70.10-201ENST00000384515 134 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 SKINT1L-201ENST00000401057 817 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AL049545.1-201ENST00000401856 572 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AL390316.1-201ENST00000406279 553 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AL031779.1-201ENST00000415663 330 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 OR5M12P-201ENST00000423388 929 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC007559.1-201ENST00000428736 355 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 RPS6P15-201ENST00000431996 751 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC093414.1-201ENST00000434712 514 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC245517.2-201ENST00000442890 346 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 CYCSP24-201ENST00000445119 316 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AL096829.2-201ENST00000446582 742 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 RBMY2TP-201ENST00000451162 947 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC010468.1-201ENST00000461022 817 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC096741.1-201ENST00000472250 846 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC118942.1-201ENST00000529674 1035 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 MTCYBP33-201ENST00000575007 1130 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC006272.2-201ENST00000594725 163 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC011492.1-201ENST00000600023 315 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AL160237.3-201ENST00000604114 1013 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AL391358.1-201ENST00000605342 190 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC004241.3-201ENST00000611728 517 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 MIR6780A-201ENST00000615089 68 ntBASIC5.15□□□□□ -1.59
EBF3Q9H4W6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
EBF3Q9H4W6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 CR382285.2-201ENST00000624662 1495 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 MFSD8-216ENST00000641147 4009 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC019072.1-201ENST00000604535 1551 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC079741.1-201ENST00000321498 212 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms