Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNA5SP171-201ENST00000391071 115 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 HMGB3P7-201ENST00000400214 611 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 SNORA11.2-201ENST00000408318 127 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 TBCAP2-201ENST00000416175 326 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC006065.1-201ENST00000422539 802 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 AL645608.4-201ENST00000423619 154 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC007559.1-201ENST00000428736 355 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 BX119904.1-201ENST00000432026 348 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 AL359265.2-201ENST00000434367 631 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 CEACAMP6-201ENST00000452007 574 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AL356218.2-201ENST00000605264 187 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 COX6CP4-201ENST00000605798 228 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC015908.5-201ENST00000623289 343 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM4Q9C037 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM4Q9C037 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM4Q9C037 PNPT1P2-201ENST00000456768 2050 ntBASIC4.6□□□□□ -1.67
TRIM4Q9C037 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TRIM4Q9C037 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM4Q9C037 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM4Q9C037 AL590240.1-201ENST00000334118 313 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
TRIM4Q9C037 MIR670-201ENST00000390142 98 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 ARL4AP5-201ENST00000404372 599 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM4Q9C037 U3.35-201ENST00000408405 208 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 CCT8P1-201ENST00000413611 1657 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM4Q9C037 RPS27AP12-201ENST00000429552 465 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 RPS6P12-201ENST00000432491 726 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM4Q9C037 AL133477.1-201ENST00000457472 514 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 SEPT14P1-201ENST00000458703 648 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 RPL23AP56-201ENST00000460778 453 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.59□□□□□ -1.67
TRIM4Q9C037 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM4Q9C037 IGLV3-26-201ENST00000520756 302 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM4Q9C037 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.59□□□□□ -1.67
TRIM4Q9C037 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM4Q9C037 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM4Q9C037 AC011944.2-201ENST00000624440 683 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 AC132825.8-201ENST00000640783 297 ntBASIC4.59□□□□□ -1.67
TRIM4Q9C037 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM4Q9C037 MAPK10-304ENST00000641341 3984 ntBASIC4.59□□□□□ -1.68
TRIM4Q9C037 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM4Q9C037 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM4Q9C037 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
TRIM4Q9C037 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM4Q9C037 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM4Q9C037 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 AL021331.1-201ENST00000402817 582 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 SNORA11.1-201ENST00000408133 129 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 RPL12P34-201ENST00000424532 479 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 MAPRE1P3-201ENST00000435438 796 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 RPL7P28-201ENST00000437739 740 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 RPL7P32-201ENST00000457119 744 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 AC020593.1-201ENST00000507399 299 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM4Q9C037 HNRNPKP5-201ENST00000515300 253 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 SOX5P1-201ENST00000524155 1127 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 RPL12P25-202ENST00000598100 674 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 AC010424.2-201ENST00000607594 443 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 AC006453.5-201ENST00000636451 619 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM4Q9C037 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM4Q9C037 AC099654.2-201ENST00000433031 1980 ntBASIC4.58□□□□□ -1.68
TRIM4Q9C037 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
TRIM4Q9C037 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM4Q9C037 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM4Q9C037 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM4Q9C037 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms