Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.28□□□□□ -1.24
HLA-CQ95604 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 AL355377.1-201ENST00000621125 1653 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
HLA-CQ95604 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
HLA-CQ95604 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
HLA-CQ95604 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 SAMMSON-222ENST00000641901 2727 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 RN7SKP69-201ENST00000365390 305 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 RNU6-444P-201ENST00000383988 108 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
HLA-CQ95604 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 AC009302.1-201ENST00000417147 390 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 RPS20P5-201ENST00000434808 360 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 AL954705.1-201ENST00000435277 559 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 MTND1P9-201ENST00000453775 944 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 RPS26P24-201ENST00000497656 331 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-CQ95604 AC008945.1-201ENST00000505144 499 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.27□□□□□ -1.25
HLA-CQ95604 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.27□□□□□ -1.25
HLA-CQ95604 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-CQ95604 IMMP1LP2-201ENST00000552954 492 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-CQ95604 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.27□□□□□ -1.25
HLA-CQ95604 MIR3614-201ENST00000581261 86 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-CQ95604 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 AC124916.2-201ENST00000604416 224 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 AL592436.1-201ENST00000605135 558 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 MIR6798-201ENST00000612887 67 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 AL096712.1-201ENST00000614561 159 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 AC104966.1-201ENST00000467010 1464 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 AL136146.1-201ENST00000529830 1667 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-CQ95604 MRE11P1-201ENST00000464884 2127 ntBASIC7.27□□□□□ -1.25
HLA-CQ95604 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-CQ95604 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
HLA-CQ95604 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
HLA-CQ95604 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 ZNF840P-201ENST00000504759 1996 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 DLEU2L-201ENST00000371086 3555 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 AL161781.1-201ENST00000354277 403 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RNA5SP77-201ENST00000365394 120 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RN7SKP81-201ENST00000365603 331 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RNU6-38P-201ENST00000384085 107 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RNU6-1032P-201ENST00000384100 107 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 UBBP1-201ENST00000392399 473 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AL360271.1-201ENST00000395679 510 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RPL12P23-201ENST00000405880 490 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RNA5SP198-201ENST00000410376 127 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RN7SKP247-201ENST00000411094 308 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms