Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 AC092473.1-201ENST00000441098 221 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 EIF2S2P5-201ENST00000457635 968 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 AC108751.2-201ENST00000469993 231 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 RPL23AP37-201ENST00000479658 549 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 AC010460.1-201ENST00000507087 466 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 ATP1B1P1-201ENST00000509767 915 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNED1Q8TER0 MTND4LP31-201ENST00000514859 294 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 RPL23AP97-201ENST00000568955 471 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 AC090079.2-201ENST00000575289 768 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 AL021997.2-201ENST00000615674 271 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 MIR8069-1-201ENST00000616627 86 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 MIR8069-2-201ENST00000621412 86 ntBASIC5.24□□□□□ -1.57
SNED1Q8TER0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNED1Q8TER0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNED1Q8TER0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.24□□□□□ -1.57
SNED1Q8TER0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 MIR449B-201ENST00000384995 97 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 SNORA40.4-201ENST00000390971 128 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 MIR921-201ENST00000401133 56 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AL607077.1-201ENST00000401718 499 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 SMC4P1-201ENST00000414479 527 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 CDY14P-201ENST00000431260 1014 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 CDY12P-201ENST00000440679 1015 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 CDY13P-201ENST00000445813 1015 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 CDY23P-201ENST00000451661 1014 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC104849.1-201ENST00000462623 405 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 MTND3P3-201ENST00000505004 126 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNED1Q8TER0 RNA5SP497-201ENST00000516081 97 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 RN7SKP5-201ENST00000517045 272 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 OR7E10P-201ENST00000526420 991 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 RN7SL339P-201ENST00000580597 296 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC008739.3-201ENST00000603262 127 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNED1Q8TER0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNED1Q8TER0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNED1Q8TER0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNED1Q8TER0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNED1Q8TER0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 OR56B2P-201ENST00000317102 954 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 RNA5SP307-201ENST00000362863 116 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 SNORA73.2-201ENST00000364946 201 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 SNORA11.1-201ENST00000408133 129 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AP000357.1-201ENST00000409926 1165 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 TCEA1P4-201ENST00000415066 844 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 MTND2P15-201ENST00000418575 892 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 NPM1P48-201ENST00000436002 853 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 AL157884.3-201ENST00000448273 1184 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC091564.1-201ENST00000464563 479 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 KCTD9P2-201ENST00000512203 1013 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC005034.4-201ENST00000603612 899 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC069200.1-201ENST00000609511 323 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SNED1Q8TER0 AC106730.3-201ENST00000624568 641 ntBASIC5.23□□□□□ -1.57
SNED1Q8TER0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.22□□□□□ -1.57
SNED1Q8TER0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNED1Q8TER0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SNED1Q8TER0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms