Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC017007.4-201ENST00000503353 1352 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL391994.1-201ENST00000254724 282 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 NACA3P-201ENST00000359690 648 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 Y_RNA.465-201ENST00000384293 102 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 MT-TH-201ENST00000387441 69 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 SNORD65C-201ENST00000390962 71 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 RPL35AP24-201ENST00000413846 330 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 BTF3P9-201ENST00000418784 283 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 MTND4P28-201ENST00000426217 387 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 VTI1BP4-201ENST00000427516 527 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 ETF1P3-201ENST00000430422 1160 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL121601.2-201ENST00000438019 707 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 MTCYBP34-201ENST00000439552 670 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 PPIAP20-201ENST00000449839 135 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC058823.1-201ENST00000485315 474 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 UBA52P7-201ENST00000486088 380 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 HMGN1P9-201ENST00000515212 298 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 MTCO3P15-201ENST00000526563 574 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC027026.1-201ENST00000532323 742 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 NMNAT1P5-201ENST00000559657 841 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AADACP1-206ENST00000561502 1193 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 WISP1-OT1-201ENST00000602893 642 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 LARP7P1-201ENST00000605576 316 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL592494.3-201ENST00000609485 464 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL121873.1-201ENST00000616013 524 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC109583.2-201ENST00000617367 129 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 RNA5SP439-201ENST00000617595 124 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 MIR6729-201ENST00000618194 65 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 AC099654.6-201ENST00000636487 512 ntBASIC5.28□□□□□ -1.56
VRK3Q8IV63 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
VRK3Q8IV63 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VRK3Q8IV63 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 RNU6-1119P-201ENST00000384349 108 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 OR3A2-201ENST00000408891 1076 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 RNU4-74P-201ENST00000411280 161 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC023128.2-201ENST00000420880 1223 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 EIF1P1-201ENST00000421436 341 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC079355.1-201ENST00000421770 223 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 DSTNP5-201ENST00000427921 523 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 RPL12P17-201ENST00000432393 498 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 CYCSP6-201ENST00000434498 302 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AL592437.1-201ENST00000443781 492 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 HMGB1P48-201ENST00000446155 598 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms